PMID- 10330132 OWN - NLM STAT- MEDLINE DCOM- 19990624 LR - 20181113 IS - 1088-9051 (Print) IS - 1088-9051 (Linking) VI - 9 IP - 5 DP - 1999 May TI - Mouse molecular cytogenetic resource: 157 BACs link the chromosomal and genetic maps. PG - 514-23 AB - We have established a collection of strong molecular cytogenetic markers that span the mouse autosomes and X chromosome at an average spacing of one per 19 Mb and identify 127 distinct band landmarks. In addition, this Mouse Molecular Cytogenetic Resource relates the ends of the genetic maps to their chromosomal locations. The resource consists of 157 bacterial artificial chromosome (BAC) clones, each of which identifies specific mouse chromosome bands or band borders, and 42 of which are linked to genetic markers that define the centromeric and telomeric ends of the Whitehead/MIT recombinational maps. In addition, 108 randomly selected and 6 STS-linked BACs have been assigned to single chromosome bands. We have also developed a high-resolution fluorescent reverse-banding technique for mouse chromosomes that allows simultaneous localization of probes by fluorescence in situ hybridization (FISH) with respect to the cytogenetic landmarks. This approach integrates studies of the entire mouse genome. Moreover, these reagents will simplify gene mapping and analyses of genomic fragments in fetal and adult mouse models. As shown with the MMU16 telomeric marker for the trisomy 16 mouse model of Down syndrome, these clones can obviate the need for metaphase analyses. The potential contribution of this resource and associated methods extends well beyond mapping and includes clues to understanding mouse chromosomes and their rearrangements in cancers and evolution. Finally it will facilitate the development of an integrated view of the mouse genome by providing anchor points from the genetic to the cytogenetic and functional maps of the mouse as we attempt to understand mutations, their biological consequences, and gene function. FAU - Korenberg, J R AU - Korenberg JR AD - Medical Genetics Birth Defects Center, Cedars-Sinai Medical Center, University of California, Los Angeles, Los Angeles, California 90048, USA. julie.korenberg@cshs.org FAU - Chen, X N AU - Chen XN FAU - Devon, K L AU - Devon KL FAU - Noya, D AU - Noya D FAU - Oster-Granite, M L AU - Oster-Granite ML FAU - Birren, B W AU - Birren BW LA - eng GR - R01 HG00934/HG/NHGRI NIH HHS/United States GR - R01 HL50025/HL/NHLBI NIH HHS/United States PT - Journal Article PT - Research Support, U.S. Gov't, Non-P.H.S. PT - Research Support, U.S. Gov't, P.H.S. PL - United States TA - Genome Res JT - Genome research JID - 9518021 RN - 0 (Genetic Markers) SB - IM MH - Animals MH - Chromosome Banding/methods MH - Chromosome Mapping/*methods MH - Chromosomes, Bacterial/*genetics MH - Genetic Markers/*genetics MH - In Situ Hybridization, Fluorescence/methods MH - Karyotyping MH - Mice MH - Mice, Inbred Strains MH - Telomere/genetics PMC - PMC310771 EDAT- 1999/05/18 00:00 MHDA- 1999/05/18 00:01 PMCR- 1999/11/01 CRDT- 1999/05/18 00:00 PHST- 1999/05/18 00:00 [pubmed] PHST- 1999/05/18 00:01 [medline] PHST- 1999/05/18 00:00 [entrez] PHST- 1999/11/01 00:00 [pmc-release] PST - ppublish SO - Genome Res. 1999 May;9(5):514-23.