PMID- 10427073
OWN - NLM
STAT- MEDLINE
DCOM- 19990915
LR  - 20240109
IS  - 0099-2240 (Print)
IS  - 1098-5336 (Electronic)
IS  - 0099-2240 (Linking)
VI  - 65
IP  - 8
DP  - 1999 Aug
TI  - Bacterioplankton compositions of lakes and oceans: a first comparison based on 
      fluorescence in situ hybridization.
PG  - 3721-6
AB  - Fluorescence in situ hybridization (FISH) with rRNA-targeted oligonucleotide 
      probes was used to investigate the phylogenetic composition of bacterioplankton 
      communities in several freshwater and marine samples. An average of about 50% of 
      the cells were detected by probes for the domains Bacteria and Archaea, and of 
      these, about half could be identified at the subdomain level with a set of 
      group-specific probes. Beta subclass proteobacteria constituted a dominant 
      fraction in freshwater systems, accounting for 16% (range, 3 to 32%) of the 
      cells, although they were essentially absent in the marine samples examined. 
      Members of the Cytophaga-Flavobacterium cluster were the most abundant group 
      detected in the marine systems, accounting for 18% (range, 2 to 72%) of the 
      4',6-diamidino-2-phenylindole (DAPI) counts, and they were also important in 
      freshwater systems (7%, range 0 to 18%). Furthermore, members of the alpha and 
      gamma subclasses of Proteobacteria as well as members of the Planctomycetales 
      were detected in both freshwater and marine water in abundances <7%.
FAU - Glockner, F O
AU  - Glockner FO
AD  - Max-Planck-Institut fur Marine Mikrobiologie, Bremen, Germany.
FAU - Fuchs, B M
AU  - Fuchs BM
FAU - Amann, R
AU  - Amann R
LA  - eng
PT  - Comparative Study
PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
PL  - United States
TA  - Appl Environ Microbiol
JT  - Applied and environmental microbiology
JID - 7605801
RN  - 0 (DNA Probes)
SB  - IM
MH  - Animals
MH  - Archaea/classification/genetics/isolation & purification
MH  - Bacteria/classification/genetics/isolation & purification
MH  - Base Sequence
MH  - Colony Count, Microbial
MH  - Cytophaga/classification/genetics/isolation & purification
MH  - DNA Probes/genetics
MH  - Flavobacterium/classification/genetics/isolation & purification
MH  - Fresh Water/*microbiology
MH  - In Situ Hybridization, Fluorescence
MH  - Plankton/*genetics/*isolation & purification
MH  - Seawater/*microbiology
PMC - PMC91558
EDAT- 1999/07/31 00:00
MHDA- 1999/07/31 00:01
PMCR- 1999/08/01
CRDT- 1999/07/31 00:00
PHST- 1999/07/31 00:00 [pubmed]
PHST- 1999/07/31 00:01 [medline]
PHST- 1999/07/31 00:00 [entrez]
PHST- 1999/08/01 00:00 [pmc-release]
AID - 0378 [pii]
AID - 10.1128/AEM.65.8.3721-3726.1999 [doi]
PST - ppublish
SO  - Appl Environ Microbiol. 1999 Aug;65(8):3721-6. doi: 
      10.1128/AEM.65.8.3721-3726.1999.