PMID- 10690959 OWN - NLM STAT- MEDLINE DCOM- 20000306 LR - 20221207 IS - 0026-0495 (Print) IS - 0026-0495 (Linking) VI - 49 IP - 2 DP - 2000 Feb TI - Molecular scanning analysis of hepatocyte nuclear factor 1alpha (TCF1) gene in typical familial type 2 diabetes in African Americans. PG - 280-4 AB - Type 2 diabetes mellitus (T2DM) is strongly inherited, but the major genes for this disease have been elusive. In contrast, early-onset, autosomal-dominant diabetes results from at least 5 loci, of which hepatocyte nuclear factor 1a (HNF1alpha or TCF1) is the most common cause. Mutations in HNF1alpha also cause later-onset diabetes in some Caucasian populations, but the role of these mutations has not been tested in African American populations. We used a variety of screening methods, including both single-strand conformation polymorphism (SSCP) analysis and dideoxy fingerprint analysis, to search for mutations in 51 African American subjects with onset of diabetes before age 50 years. Potential mutations were confirmed by direct sequencing. We identified 21 different variants, of which 11 were unique to African Americans. Four mutations either altered the amino acid sequence (Gly52Ala and Gly574Ser) or were close to a splice site (intron 1 and intron 10). A 5-nucleotide insertion in intron 1 was present in both diabetic members of a small family, but Gly52Ala, Gly574Ser, and the intron 10 mutation did not segregate with diabetes. Gly574Ser was present in 2 large families and 5% of controls, all of which appeared to share the same common HNF1alpha haplotype. Surprisingly, radioactive SSCP analysis under 2 room-temperature conditions performed as well as methods using fluorescent labeling that were expected to be more sensitive. We conclude that in African American individuals under age 50, variation in the HNF1a gene is common but unlikely to be a significant cause of T2DM. FAU - Elbein, S C AU - Elbein SC AD - Division of Endocrinology, Central Arkansas Veterans Health System and University of Arkansas for Medical Sciences, Little Rock, USA. FAU - Teng, K AU - Teng K FAU - Eddings, K AU - Eddings K FAU - Hargrove, D AU - Hargrove D FAU - Scroggin, E AU - Scroggin E LA - eng GR - DK39301/DK/NIDDK NIH HHS/United States PT - Clinical Trial PT - Journal Article PT - Research Support, Non-U.S. Gov't PT - Research Support, U.S. Gov't, Non-P.H.S. PT - Research Support, U.S. Gov't, P.H.S. PL - United States TA - Metabolism JT - Metabolism: clinical and experimental JID - 0375267 RN - 0 (DNA-Binding Proteins) RN - 0 (HNF1A protein, human) RN - 0 (HNF1B protein, human) RN - 0 (Hepatocyte Nuclear Factor 1-alpha) RN - 0 (Nuclear Proteins) RN - 0 (Transcription Factors) RN - 126548-29-6 (Hepatocyte Nuclear Factor 1) RN - 138674-15-4 (Hepatocyte Nuclear Factor 1-beta) SB - IM MH - Adult MH - Black or African American MH - Alleles MH - *DNA-Binding Proteins MH - Diabetes Mellitus, Type 2/*genetics MH - Exons/genetics MH - Female MH - Hepatocyte Nuclear Factor 1 MH - Hepatocyte Nuclear Factor 1-alpha MH - Hepatocyte Nuclear Factor 1-beta MH - Humans MH - Introns/genetics MH - Male MH - Middle Aged MH - Nuclear Proteins/*genetics MH - Polymerase Chain Reaction MH - Polymorphism, Single-Stranded Conformational MH - Transcription Factors/*genetics EDAT- 2000/02/26 09:00 MHDA- 2000/03/11 09:00 CRDT- 2000/02/26 09:00 PHST- 2000/02/26 09:00 [pubmed] PHST- 2000/03/11 09:00 [medline] PHST- 2000/02/26 09:00 [entrez] AID - S0026-0495(00)91663-9 [pii] AID - 10.1016/s0026-0495(00)91663-9 [doi] PST - ppublish SO - Metabolism. 2000 Feb;49(2):280-4. doi: 10.1016/s0026-0495(00)91663-9.