PMID- 10751034 OWN - NLM STAT- MEDLINE DCOM- 20000605 LR - 20190818 IS - 0724-8741 (Print) IS - 0724-8741 (Linking) VI - 17 IP - 2 DP - 2000 Feb TI - Metal-catalyzed oxidation of brain-derived neurotrophic factor (BDNF): analytical challenges for the identification of modified sites. PG - 190-6 AB - PURPOSE: We examined the metal-catalyzed oxidation of brain-derived neurotrophic factor (BDNF) using the Cu(II)/ascorbate/O2 model oxidative system. METHODS: Electrospray ionization mass spectrometry, peptide mapping and amino acid analysis were utilized to determine the nature of the covalent modification induced by the metal-catalyzed oxidative system. Additionally, analytical ultracentrifugation, the Bradford assay, circular dichroism and ANSA dye-binding were used to determine the nature of any conformational changes induced by the oxidation. RESULTS: Exposure of BDNF to the Cu(II)/ascorbate/O2 system led to the modification of ca. 35% of Met92 to its sulfoxide, and to subsequent conformational changes. The proteolytic digestion procedure was sensitive to this conformational change, and was unable to detect the modification. Chemical digestion with CNBr, however, was not sensitive to this change, and allowed for the identification of the site of modification. CONCLUSIONS: The modification of Met92 to its sulfoxide rendered the oxidized BDNF inaccessible to proteolytic digestion, due to conformational changes associated with the oxidation. FAU - Jensen, J L AU - Jensen JL AD - Department of Pharmaceutical Chemistry, University of Kansas, Lawrence 66047, USA. FAU - Kolvenbach, C AU - Kolvenbach C FAU - Roy, S AU - Roy S FAU - Schoneich, C AU - Schoneich C LA - eng GR - P01AG12993-02/AG/NIA NIH HHS/United States GR - T32 GM08359-11/GM/NIGMS NIH HHS/United States PT - Journal Article PT - Research Support, Non-U.S. Gov't PT - Research Support, U.S. Gov't, P.H.S. PL - United States TA - Pharm Res JT - Pharmaceutical research JID - 8406521 RN - 0 (Anilino Naphthalenesulfonates) RN - 0 (Brain-Derived Neurotrophic Factor) RN - 0 (Fluorescent Dyes) RN - 789U1901C5 (Copper) RN - 83662-03-7 (6-anilino-1-naphthalenesulfonic acid) RN - AE28F7PNPL (Methionine) RN - EC 3.4.- (Endopeptidases) RN - OS382OHJ8P (Cyanogen Bromide) RN - PQ6CK8PD0R (Ascorbic Acid) RN - S88TT14065 (Oxygen) RN - XN1XVI4B2C (methionine sulfoxide) SB - IM MH - Amino Acid Sequence MH - Anilino Naphthalenesulfonates/analysis/chemistry/pharmacology MH - Ascorbic Acid/metabolism MH - Brain-Derived Neurotrophic Factor/analysis/chemistry/*metabolism MH - Catalytic Domain MH - Chromatography, High Pressure Liquid MH - Copper/chemistry/*metabolism MH - Cyanogen Bromide/chemistry MH - Endopeptidases/pharmacology MH - Fluorescent Dyes/analysis/chemistry/pharmacology MH - Methionine/analogs & derivatives/chemistry MH - Molecular Sequence Data MH - Molecular Weight MH - Oxidation-Reduction MH - Oxygen/metabolism MH - Protein Conformation MH - Protein Denaturation MH - Sequence Analysis, Protein MH - Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization MH - Ultracentrifugation EDAT- 2000/04/06 09:00 MHDA- 2000/06/10 09:00 CRDT- 2000/04/06 09:00 PHST- 2000/04/06 09:00 [pubmed] PHST- 2000/06/10 09:00 [medline] PHST- 2000/04/06 09:00 [entrez] AID - 10.1023/a:1007569431038 [doi] PST - ppublish SO - Pharm Res. 2000 Feb;17(2):190-6. doi: 10.1023/a:1007569431038.