PMID- 10798355 OWN - NLM STAT- MEDLINE DCOM- 20000523 LR - 20190722 IS - 0340-6717 (Print) IS - 0340-6717 (Linking) VI - 106 IP - 3 DP - 2000 Mar TI - Identification of a gene disrupted by inv(11)(q13.5;q25) in a patient with left-right axis malformation. PG - 277-87 AB - An inv(11)(q13.5;q25) inversion was previously identified in a 9-month-old male patient with complex cyanotic heart defects, altered lung lobation, symmetric liver, and abnormally lobulated spleen (polysplenia). This chromosomal rearrangement was inherited from the phenotypically normal father. We termed these regions DHTX-A (disrupted in heterotaxy)-- A at 11q13.5 and DHTX-B at 11q25. Here, we report the isolation and characterization of the inversion breakpoints and the gene that is disrupted by the DHTX-A breakpoint. The putative DHTX is identical to the UVRAG gene, which was originally identified as a gene that complements the UV sensitivity of xeroderma pigmentosum complementation group C. The 4-kb mRNA was found to be encoded by a large gene, at least 300 kb long, composed of 15 exons. The function of the gene product remains largely unknown. However, the near central portion of the UVRAG protein is predicted to contain a coiled-coil domain, which has been implicated in mediating protein-protein interactions. Southern analyses and fluorescence in situ hybridization (FISH) revealed that the DHTX-A breakpoint in the patient and his father lies within the intron between exons 6 and 7 of UVRAG. Northern blot analysis indicated strong expression in human fetal and adult tissues and in mouse embryonic day-7 and adult tissues, respectively. Whole mount in situ hybridization also showed that the Uvrag gene is expressed in the presomite-stage embryo. Several hypotheses are discussed to explain the relationship between the chromosomal inversion and the accompanying phenotypes. FAU - Iida, A AU - Iida A AD - Department of Molecular Biology, Institute of Gerontology (ROUKEN), Nippon Medical School, Kawasaki, Kanagawa, Japan. ariiida@nms.ac.jp FAU - Emi, M AU - Emi M FAU - Matsuoka, R AU - Matsuoka R FAU - Hiratsuka, E AU - Hiratsuka E FAU - Okui, K AU - Okui K FAU - Ohashi, H AU - Ohashi H FAU - Inazawa, J AU - Inazawa J FAU - Fukushima, Y AU - Fukushima Y FAU - Imai, T AU - Imai T FAU - Nakamura, Y AU - Nakamura Y LA - eng SI - GENBANK/AB012958 SI - GENBANK/AB020334 SI - GENBANK/AB030580 PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - Germany TA - Hum Genet JT - Human genetics JID - 7613873 RN - 0 (Proteins) RN - 0 (RNA, Messenger) RN - 0 (Tumor Suppressor Proteins) RN - 0 (UVRAG protein, human) SB - IM MH - Amino Acid Sequence MH - Animals MH - Base Sequence MH - Blotting, Southern MH - Cell Line MH - Chromosome Aberrations/*genetics MH - Chromosome Inversion MH - *Chromosomes, Human, Pair 11 MH - Cloning, Molecular MH - Dextrocardia/genetics MH - Embryonic and Fetal Development MH - Exons MH - Heart Defects, Congenital/diagnostic imaging/*genetics MH - Humans MH - In Situ Hybridization MH - Infant MH - Introns MH - Male MH - Mice MH - Molecular Sequence Data MH - Physical Chromosome Mapping MH - Proteins/chemistry/*genetics MH - RNA, Messenger/genetics MH - Radiography MH - Tumor Suppressor Proteins EDAT- 2000/05/08 09:00 MHDA- 2000/06/08 09:00 CRDT- 2000/05/08 09:00 PHST- 2000/05/08 09:00 [pubmed] PHST- 2000/06/08 09:00 [medline] PHST- 2000/05/08 09:00 [entrez] AID - 10.1007/s004390051038 [doi] PST - ppublish SO - Hum Genet. 2000 Mar;106(3):277-87. doi: 10.1007/s004390051038.