PMID- 11736809
OWN - NLM
STAT- MEDLINE
DCOM- 20020214
LR  - 20190916
IS  - 0268-9146 (Print)
IS  - 0268-9146 (Linking)
VI  - 32
IP  - 6
DP  - 2001 Dec
TI  - An updated linkage and comparative map of porcine chromosome 18.
PG  - 375-9
AB  - Swine chromosome 18 (SSC18) has the poorest marker density in the USDA-MARC 
      porcine linkage map. In order to increase the marker density, seven genes from 
      human chromosome 7 (HSA7) expected to map to SSC18 were selected for marker 
      development. The genes selected were: growth hormone releasing hormone receptor 
      (GHRHR), GLI-Kruppel family member (GLI3), leptin (LEP), capping protein muscle 
      Z-line alpha 2 subunit (CAPZA2), beta A inhibin (INHBA), T-cell receptor beta 
      (TCRB) and T-cell receptor gamma (TCRG). Large-insert clones (YACs, BACs and 
      cosmids) that contained these genes, as well as two previously mapped 
      microsatellite markers (SW1808 and SW1984), were identified and screened for 
      microsatellites. New microsatellite markers were developed from these clones and 
      mapped. Selected clones were also physically assigned by fluorescence in situ 
      hybridization (FISH). Fifteen new microsatellite markers were added to the SSC18 
      linkage map resulting in a map of 28 markers. Six genes have been included into 
      the genetic map improving the resolution of the SSC18 and HSA7 comparative map. 
      Assignment of TCRG to SSC9 has identified a break in conserved synteny between 
      SSC18 and HSA7.
FAU - Campbell, E M
AU  - Campbell EM
AD  - USDA, ARS, US Meat Animal Research Center, PO Box 166, Spur 18D, Clay Center, NE 
      68933-0166, USA.
FAU - Fahrenkrug, S C
AU  - Fahrenkrug SC
FAU - Vallet, J L
AU  - Vallet JL
FAU - Smith, T P
AU  - Smith TP
FAU - Rohrer, G A
AU  - Rohrer GA
LA  - eng
PT  - Journal Article
PL  - England
TA  - Anim Genet
JT  - Animal genetics
JID - 8605704
RN  - 0 (CapZ Actin Capping Protein)
RN  - 0 (DNA-Binding Proteins)
RN  - 0 (GLI3 protein, Xenopus)
RN  - 0 (GLI3 protein, human)
RN  - 0 (Gli3 protein, mouse)
RN  - 0 (Kruppel-Like Transcription Factors)
RN  - 0 (Leptin)
RN  - 0 (Microfilament Proteins)
RN  - 0 (Muscle Proteins)
RN  - 0 (Nerve Tissue Proteins)
RN  - 0 (Receptors, Antigen, T-Cell, alpha-beta)
RN  - 0 (Receptors, Antigen, T-Cell, gamma-delta)
RN  - 0 (Repressor Proteins)
RN  - 0 (Transcription Factors)
RN  - 0 (Xenopus Proteins)
RN  - 0 (Zinc Finger Protein Gli3)
RN  - 0 (inhibin beta A subunit)
RN  - 93443-12-0 (Inhibin-beta Subunits)
SB  - IM
MH  - Animals
MH  - CapZ Actin Capping Protein
MH  - Chromosome Mapping/*veterinary
MH  - Chromosomes, Human, Pair 7
MH  - DNA-Binding Proteins/genetics
MH  - Genetic Linkage
MH  - Humans
MH  - In Situ Hybridization, Fluorescence
MH  - Inhibin-beta Subunits/genetics
MH  - Kruppel-Like Transcription Factors
MH  - Leptin/genetics
MH  - Microfilament Proteins/genetics
MH  - Microsatellite Repeats/genetics
MH  - Muscle Proteins/genetics
MH  - *Nerve Tissue Proteins
MH  - Receptors, Antigen, T-Cell, alpha-beta/genetics
MH  - Receptors, Antigen, T-Cell, gamma-delta/genetics
MH  - *Repressor Proteins
MH  - Swine/*genetics
MH  - Transcription Factors/genetics
MH  - *Xenopus Proteins
MH  - Zinc Finger Protein Gli3
EDAT- 2001/12/12 10:00
MHDA- 2002/02/15 10:01
CRDT- 2001/12/12 10:00
PHST- 2001/12/12 10:00 [pubmed]
PHST- 2002/02/15 10:01 [medline]
PHST- 2001/12/12 10:00 [entrez]
AID - 782 [pii]
AID - 10.1046/j.1365-2052.2001.00782.x [doi]
PST - ppublish
SO  - Anim Genet. 2001 Dec;32(6):375-9. doi: 10.1046/j.1365-2052.2001.00782.x.