PMID- 12204689 OWN - NLM STAT- MEDLINE DCOM- 20030606 LR - 20191025 IS - 1074-5521 (Print) IS - 1074-5521 (Linking) VI - 9 IP - 8 DP - 2002 Aug TI - Functional analysis of the lipoglycodepsipeptide antibiotic ramoplanin. PG - 897-906 AB - The peptide antibiotic ramoplanin is highly effective against several drug-resistant gram-positive bacteria, including vancomycin-resistant Enterococcus faecium (VRE) and methicillin-resistant Staphylococcus aureus (MRSA), two important opportunistic human pathogens. Ramoplanin inhibits bacterial peptidoglycan (PG) biosynthesis by binding to Lipid intermediates I and II at a location different than the N-acyl-D-Ala-D-Ala dipeptide site targeted by vancomycin. Lipid I/II capture physically occludes these substrates from proper utilization by the late-stage PG biosynthesis enzymes MurG and the transglycosylases. Key structural features of ramoplanin responsible for antibiotic activity and PG molecular recognition have been discovered by antibiotic semisynthetic modification in conjunction with NMR analyses. These results help define a minimalist ramoplanin pharmacophore and introduce the possibility of generating ramoplanin-derived peptide or peptidomimetic antibiotics for use against VRE, MRSA, and related pathogens. FAU - Cudic, Predrag AU - Cudic P AD - Johnson Research Foundation, Department of Biochemistry and Biophysics, Philadelphia, PA 19104, USA. FAU - Behenna, Douglas C AU - Behenna DC FAU - Kranz, James K AU - Kranz JK FAU - Kruger, Ryan G AU - Kruger RG FAU - Wand, A Joshua AU - Wand AJ FAU - Veklich, Yuri I AU - Veklich YI FAU - Weisel, John W AU - Weisel JW FAU - McCafferty, Dewey G AU - McCafferty DG LA - eng GR - DK39806/DK/NIDDK NIH HHS/United States GR - GM20206/GM/NIGMS NIH HHS/United States GR - AI46611/AI/NIAID NIH HHS/United States GR - HL30954/HL/NHLBI NIH HHS/United States GR - R01 AI046611/AI/NIAID NIH HHS/United States PT - Journal Article PT - Research Support, Non-U.S. Gov't PT - Research Support, U.S. Gov't, P.H.S. PL - United States TA - Chem Biol JT - Chemistry & biology JID - 9500160 RN - 0 (Anti-Bacterial Agents) RN - 0 (Depsipeptides) RN - 0 (Peptides, Cyclic) RN - 0 (Peptidoglycan) RN - 0WX9996O2G (ramoplanin) RN - E524N2IXA3 (Ornithine) SB - IM MH - Anti-Bacterial Agents/*chemistry/pharmacology MH - *Depsipeptides MH - Dimerization MH - Drug Design MH - Drug Stability MH - Glycosylation MH - Molecular Conformation MH - Ornithine MH - Peptides, Cyclic/*chemistry/pharmacology MH - Peptidoglycan/biosynthesis/drug effects/metabolism MH - Structure-Activity Relationship EDAT- 2002/09/03 10:00 MHDA- 2003/06/07 05:00 CRDT- 2002/09/03 10:00 PHST- 2002/09/03 10:00 [pubmed] PHST- 2003/06/07 05:00 [medline] PHST- 2002/09/03 10:00 [entrez] AID - S1074552102001916 [pii] AID - 10.1016/s1074-5521(02)00191-6 [doi] PST - ppublish SO - Chem Biol. 2002 Aug;9(8):897-906. doi: 10.1016/s1074-5521(02)00191-6.