PMID- 12589646 OWN - NLM STAT- MEDLINE DCOM- 20030311 LR - 20041117 IS - 0008-543X (Print) IS - 0008-543X (Linking) VI - 99 IP - 1 DP - 2003 Feb 25 TI - The use of CDKN2A deletion as a diagnostic marker for malignant mesothelioma in body cavity effusions. PG - 51-6 AB - BACKGROUND: The distinction between benign reactive mesothelial cells and malignant mesothelial cells in serous effusions is difficult and has an unusually high false negative rate. Unfortunately, there are no generally accepted markers to distinguish between benign reactive and malignant mesothelial cells. Homozygous deletion of CDKN2A is frequent in mesothelioma (present in > 70% of tumors). Therefore, detection of CDKN2A deletion by fluorescence in situ hybridization (FISH) was evaluated as an ancillary test in the cytologic diagnosis of malignant mesothelioma. METHODS: Dual-color FISH for CDKN2A and chromosome 9 centromere was performed on cytolyt-fixed Thinprep slides from 6 cytologically suspicious and 7 cytologically positive effusions (all with histologically confirmed mesothelioma) and in 19 cytologically benign effusions (14 pleural effusions, 3 pericardial effusions, and 2 abdominal fluid specimens). Specimens containing > or = 15 nuclei that lacked signals for CDKN2A but showed at least 1 signal for chromosome 9 centromere were considered positive. In samples with negative cytology, the nuclei of at least 100 mesothelial cells were evaluated; whereas, in specimens with positive or suspicious cytology, counting nuclei was done only if < 15% of nuclei showed homozygous loss of CDKN2A. RESULTS: Homozygous deletion was detected in mesothelial cells in six of seven specimens with positive cytology and in six of six specimens with suspicious cytology. Cytologically, there were numerous tumor cells in a single positive specimen without homozygous deletion. All 19 cytologically negative specimens were negative for CDKN2A deletion. CONCLUSIONS: The detection of homozygous CDKN2A deletion by FISH would have been helpful in confirming a diagnosis of mesothelioma over reactive mesothelial cells in 12 of 13 samples with positive or suspicious cytology. Further studies on larger series of patients with suspicious cytology are needed to evaluate the validity and efficiency of this approach for improving the diagnostic accuracy of effusion cytology. CI - Copyright 2003 American Cancer Society. FAU - Illei, Peter B AU - Illei PB AD - Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, USA. FAU - Ladanyi, Marc AU - Ladanyi M FAU - Rusch, Valerie W AU - Rusch VW FAU - Zakowski, Maureen F AU - Zakowski MF LA - eng PT - Clinical Trial PT - Journal Article PL - United States TA - Cancer JT - Cancer JID - 0374236 RN - 0 (Genetic Markers) SB - IM MH - Adult MH - Aged MH - Aged, 80 and over MH - Ascitic Fluid/cytology MH - Female MH - *Gene Deletion MH - *Genes, p16 MH - *Genetic Markers MH - Humans MH - In Situ Hybridization, Fluorescence MH - Male MH - Mesothelioma/*diagnosis/*genetics MH - Middle Aged MH - Pericardial Effusion/cytology MH - Pleural Effusion/cytology MH - Sensitivity and Specificity EDAT- 2003/02/18 04:00 MHDA- 2003/03/12 04:00 CRDT- 2003/02/18 04:00 PHST- 2003/02/18 04:00 [pubmed] PHST- 2003/03/12 04:00 [medline] PHST- 2003/02/18 04:00 [entrez] AID - 10.1002/cncr.10923 [doi] PST - ppublish SO - Cancer. 2003 Feb 25;99(1):51-6. doi: 10.1002/cncr.10923.