PMID- 12721844 OWN - NLM STAT- MEDLINE DCOM- 20031003 LR - 20181113 IS - 0032-0935 (Print) IS - 0032-0935 (Linking) VI - 217 IP - 1 DP - 2003 May TI - Effects of carbohydrate starvation on gene expression in citrus root. PG - 11-20 AB - The roots of alternate-bearing citrus (Murcott, a Citrus reticulata hybrid) trees undergo extreme fluctuations of carbohydrate abundance and starvation. Using this system, we investigated the effect of root carbohydrate (total soluble sugar, sucrose and starch) depletion on carbohydrate-related gene expression. A series of genes, including those coding for starch phosphorylase ( STPH-L and STPH-H), ADP-glucose pyrophosphorylase, small subunit ( Agps), R1, plastidic ADP/ATP transporter ( AATP), phosphoglucomutase ( PGM-P and PGM-C), sucrose synthase ( CitSuS1 and CitSuSA), sucrose transporter ( SUT1 and SUT2), hexokinase ( HK) and alpha-amylase ( alpha-AMY), have been isolated and their expression analyzed. The genes were found to respond differentially to carbohydrate depletion. STPH-L, STPH-H, Agps, R1, AATP, PGM-P, PGM-C, CitSuS1 and HK were down-regulated while SUT1 and alpha-AMY were up-regulated during carbohydrate depletion. Two other genes, CitSuSA and SUT2, did not respond to carbohydrate depletion. Fruit removal, which interrupted the carbohydrate depletion induced by heavy fruiting, reversed these gene expression patterns. Trunk girdling and whole-plant darkening treatments, which brought about root carbohydrate depletion, induced the same changes in gene expression obtained in the alternate-bearing system. The possible roles of the up- and down-regulated genes in the metabolism of carbohydrate-depleted citrus roots are discussed. Although the specific signals involved have not been determined, the results support the feast/famine hypothesis of carbohydrate regulation proposed by Koch [K.E. Koch (1996) Annu Rev Plant Physiol Plant Mol Biol 47:509-540]. FAU - Li, Chun Yao AU - Li CY AD - The Institute of Plant Sciences and Genetics in Agriculture, Faculty of Agricultural, Food, and Environmental Quality Sciences, The Hebrew University of Jerusalem, 76100, Rehovot, Israel. FAU - Weiss, David AU - Weiss D FAU - Goldschmidt, Eliezer E AU - Goldschmidt EE LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20030128 PL - Germany TA - Planta JT - Planta JID - 1250576 RN - 0 (Enzymes) RN - 57-50-1 (Sucrose) RN - 9005-25-8 (Starch) SB - IM MH - *Carbohydrate Metabolism MH - Citrus/genetics/*metabolism MH - Darkness MH - Enzymes/genetics MH - Gene Expression Profiling MH - Gene Expression Regulation, Enzymologic MH - Gene Expression Regulation, Plant MH - Microscopy, Electron, Scanning MH - Plant Roots/genetics/*metabolism/ultrastructure MH - Plant Stems/genetics/metabolism MH - Starch/metabolism MH - Sucrose/metabolism EDAT- 2003/05/02 05:00 MHDA- 2003/10/04 05:00 CRDT- 2003/05/02 05:00 PHST- 2002/06/24 00:00 [received] PHST- 2002/11/26 00:00 [accepted] PHST- 2003/05/02 05:00 [pubmed] PHST- 2003/10/04 05:00 [medline] PHST- 2003/05/02 05:00 [entrez] AID - 10.1007/s00425-002-0963-6 [doi] PST - ppublish SO - Planta. 2003 May;217(1):11-20. doi: 10.1007/s00425-002-0963-6. Epub 2003 Jan 28.