PMID- 12802818 OWN - NLM STAT- MEDLINE DCOM- 20031120 LR - 20061115 IS - 0277-6715 (Print) IS - 0277-6715 (Linking) VI - 22 IP - 12 DP - 2003 Jun 30 TI - Comparing HLA antigen frequencies between two groups of patients. PG - 1999-2013 AB - For diseases that involve the immune system, the alleles of the human leukocyte antigen (HLA) complex can play a major role. For example, if responsiveness to therapy is immunologically mediated, one would think that responders and non-responders might tend to have different HLA alleles. However, comparing the frequencies between the two groups of patients at each allele can introduce a substantial multiple comparisons problem as the number of alleles is large. This paper proposes an efficient two-stage procedure for identifying alleles that may mediate response. In the first-stage, the distribution of all alleles for the patients are compared to a reference population and a few alleles are selected. These candidate alleles are then compared between the two groups of patients using a modest Bonferroni correction. The two-stage procedure strongly controls the type I error rate as the first-stage selection is statistically independent of the second-stage tests. We analyse a cohort of patients with bone marrow failure who are classified as responders or non-responders to immunosuppressive therapy. Published in 2003 by John Wiley & Sons, Ltd. FAU - Follmann, Dean A AU - Follmann DA AD - Office of Biostatistics Research, National Heart, Lung and Blood Institute, NIH/DHHS, 2 Rockledge Center, Bethesda, MD 20892-7938, U.S.A. follmannd@nhlbi.nih.gov LA - eng PT - Comparative Study PT - Journal Article PT - Research Support, U.S. Gov't, P.H.S. PL - England TA - Stat Med JT - Statistics in medicine JID - 8215016 RN - 0 (HLA Antigens) SB - IM MH - *Alleles MH - Antigenic Variation/immunology MH - Bone Marrow Transplantation/immunology MH - Cohort Studies MH - Graft Rejection/immunology MH - HLA Antigens/*genetics/*immunology MH - Humans MH - *Models, Biological MH - Models, Statistical EDAT- 2003/06/13 05:00 MHDA- 2003/12/03 05:00 CRDT- 2003/06/13 05:00 PHST- 2003/06/13 05:00 [pubmed] PHST- 2003/12/03 05:00 [medline] PHST- 2003/06/13 05:00 [entrez] AID - 10.1002/sim.1426 [doi] PST - ppublish SO - Stat Med. 2003 Jun 30;22(12):1999-2013. doi: 10.1002/sim.1426.