PMID- 12921944 OWN - NLM STAT- MEDLINE DCOM- 20031104 LR - 20220408 IS - 0145-2126 (Print) IS - 0145-2126 (Linking) VI - 27 IP - 12 DP - 2003 Dec TI - Comparison of interphase FISH and metaphase cytogenetics to study myelodysplastic syndrome: an Eastern Cooperative Oncology Group (ECOG) study. PG - 1085-90 AB - Cytogenetic analysis can be important in determining the prognosis and diagnosis of a number of hematological disorders, including myelodysplastic syndromes (MDS). Here, we compared metaphase chromosomal analyses on bone marrow aspirates from MDS patients with interphase fluorescence in situ hybridization (FISH) using probes specific for chromosomes nos. 5, 7, 8, 11, 13 and 20. Forty-three patients enrolled in ECOG protocol E1996 for low risk MDS and five patients enrolled in ECOG protocol E3996 for high risk MDS were studied by both metaphase chromosomal analysis and interphase FISH. Excluding those with a clonal loss of the Y chromosome, an abnormal clone was detected by cytogenetic analysis in 18 of 48 samples (37.5%). In comparison, our FISH panel detected an abnormal clone in 17 of 48 samples (35.4%). Twenty-nine of 30 samples with apparently normal karyotypes, including those with a missing Y chromosome, were also normal by our FISH panel. One patient had an occult deletion of chromosome 11 that was detected by FISH. These results indicate that around 60% of patients with MDS do not have abnormalities that are detectable by either chromosomal or FISH studies. In addition, it appears that interphase FISH studies are nearly as sensitive as cytogenetic analyses and can be a useful tool in studying bone marrow aspirates where cytogenetic analysis is not possible. FAU - Cherry, Athena M AU - Cherry AM AD - Department of Pathology, Stanford Hospital and Clinics, Stanford, CA 94305, USA. athena.cherry@medventer.stanford.edu FAU - Brockman, Stephanie R AU - Brockman SR FAU - Paternoster, Sarah F AU - Paternoster SF FAU - Hicks, Gary A AU - Hicks GA FAU - Neuberg, Donna AU - Neuberg D FAU - Higgins, Rodney R AU - Higgins RR FAU - Bennett, John M AU - Bennett JM FAU - Greenberg, Peter L AU - Greenberg PL FAU - Miller, Kenneth AU - Miller K FAU - Tallman, Martin S AU - Tallman MS FAU - Rowe, Jacob AU - Rowe J FAU - Dewald, Gordon W AU - Dewald GW LA - eng PT - Comparative Study PT - Journal Article PL - England TA - Leuk Res JT - Leukemia research JID - 7706787 RN - 0 (Antineoplastic Agents) RN - 0 (DNA Probes) SB - IM MH - Antineoplastic Agents/therapeutic use MH - Bone Marrow/pathology MH - Chromosome Aberrations MH - Chromosome Banding MH - *Chromosomes, Human MH - Clinical Trials as Topic MH - DNA Probes MH - Humans MH - In Situ Hybridization, Fluorescence MH - Interphase/*genetics MH - Karyotyping MH - Metaphase/*genetics MH - Myelodysplastic Syndromes/*genetics/pathology EDAT- 2003/08/19 05:00 MHDA- 2003/11/05 05:00 CRDT- 2003/08/19 05:00 PHST- 2003/08/19 05:00 [pubmed] PHST- 2003/11/05 05:00 [medline] PHST- 2003/08/19 05:00 [entrez] AID - S0145212603001048 [pii] AID - 10.1016/s0145-2126(03)00104-8 [doi] PST - ppublish SO - Leuk Res. 2003 Dec;27(12):1085-90. doi: 10.1016/s0145-2126(03)00104-8.