PMID- 12939747 OWN - NLM STAT- MEDLINE DCOM- 20031027 LR - 20231213 IS - 1045-2257 (Print) IS - 1045-2257 (Linking) VI - 38 IP - 2 DP - 2003 Oct TI - Heterogeneity of the 7q36 breakpoints in the t(7;12) involving ETV6 in infant leukemia. PG - 191-200 AB - The t(7;12)(q36;p13) is a recurrent chromosome abnormality in infant leukemia. In these cases, the involvement of ETV6, with disruption of the gene consistently at its 5' end, has been reported by several groups. A fusion transcript between ETV6 and HLXB9 has been detected in some, but not all, reported cases of t(7;12). We report here a study based on fluorescence in situ hybridization (FISH) mapping of the translocation breakpoints in seven patients and detailed molecular studies using Southern blotting on two of these patients. The FISH studies have shown a cluster of breakpoints within a cosmid contig proximal to the HLXB9 gene. Southern blotting analysis enabled us to define two distinct breakpoints within the area covered by the cosmid contig in two patients. The analysis of an unusual case of t(7;12)(q22;p13) [full karyotype: 46,XX,der(7)t(7;12)(q22;p13)del(7)(q22q36)] also revealed a break in 7q36, although in a region proximal to the overlapping cosmids. 5' RACE PCR in one patient has shown a rearrangement involving the ETV6 allele not involved in the t(7;12), suggesting that no functional ETV6 allele might be present in this case. These data show some heterogeneity in the distribution of breakpoints in 7q36, indicating that the generation of a fusion gene might not be the mechanism responsible for leukemogenesis in the t(7;12), at least in some cases. CI - Copyright 2003 Wiley-Liss, Inc. FAU - Tosi, Sabrina AU - Tosi S AD - MRC Molecular Haematology Unit, Institute of Molecular Medicine, John Radcliffe Hospital, Oxford, United Kingdom. sabrina.tosi@ndcls.ox.ac.uk FAU - Hughes, Jim AU - Hughes J FAU - Scherer, Stephen W AU - Scherer SW FAU - Nakabayashi, Kazuhiko AU - Nakabayashi K FAU - Harbott, Jochen AU - Harbott J FAU - Haas, Oskar A AU - Haas OA FAU - Cazzaniga, Giovanni AU - Cazzaniga G FAU - Biondi, Andrea AU - Biondi A FAU - Kempski, Helena AU - Kempski H FAU - Kearney, Lyndal AU - Kearney L LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Genes Chromosomes Cancer JT - Genes, chromosomes & cancer JID - 9007329 RN - 0 (DNA-Binding Proteins) RN - 0 (Proto-Oncogene Proteins c-ets) RN - 0 (Repressor Proteins) SB - IM MH - Base Sequence MH - Chromosome Breakage/*genetics MH - Chromosomes, Human, Pair 12/*genetics MH - Chromosomes, Human, Pair 7/*genetics MH - DNA-Binding Proteins/*genetics MH - Female MH - *Genetic Heterogeneity MH - Humans MH - In Situ Hybridization, Fluorescence MH - Infant MH - Leukemia/*genetics MH - Leukemia, Myeloid, Acute/genetics MH - Leukemia, Myelomonocytic, Acute/genetics MH - Male MH - Molecular Sequence Data MH - Myelodysplastic Syndromes/genetics MH - Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics MH - Proto-Oncogene Proteins c-ets MH - Repressor Proteins/*genetics MH - Translocation, Genetic/*genetics MH - ETS Translocation Variant 6 Protein EDAT- 2003/08/27 05:00 MHDA- 2003/10/28 05:00 CRDT- 2003/08/27 05:00 PHST- 2003/08/27 05:00 [pubmed] PHST- 2003/10/28 05:00 [medline] PHST- 2003/08/27 05:00 [entrez] AID - 10.1002/gcc.10258 [doi] PST - ppublish SO - Genes Chromosomes Cancer. 2003 Oct;38(2):191-200. doi: 10.1002/gcc.10258.