PMID- 14730563 OWN - NLM STAT- MEDLINE DCOM- 20040909 LR - 20040119 IS - 0173-0835 (Print) IS - 0173-0835 (Linking) VI - 25 IP - 1 DP - 2004 Jan TI - Analytical and preparative native polyacrylamide gel electrophoresis: Investigation of the recombinant and natural major grass pollen allergen Phl p 2. PG - 14-9 AB - Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and Western blot are amongst the most popular methods for allergen characterization, such as comparison of recombinant allergens with their natural counterparts. Native PAGE was evaluated as a possible robust and simple method offering high-resolution capacity for characterization of the major grass pollen allergen Phl p 2. Analytical separation of recombinant Phl p 2 provided a superior quality control in terms of homogeneity and, after Western blotting, immunoglobulin E (IgE) reactivity. Separation of natural Phl p 2 identified two major isoforms which were shown to have different N-terminal sequences and IgE-binding properties. After isolation using preparative native PAGE in combination with electrodialysis, both isoforms were investigated by specific proteolysis and reversed-phase high-performance liquid chromatography (RP-HPLC). The results demonstrate differences in the primary structures and that the recombinant counterpart corresponds exactly to one isoform. Analytical and preparative native PAGE thus proved to be powerful tools for the investigation of allergen isoforms and quality control of recombinant counterparts. FAU - Suck, Roland AU - Suck R AD - Allergopharma Joachim Ganzer KG, Reinbek, Germany. roland.suck@allergopharma.de FAU - Petersen, Arnd AU - Petersen A FAU - Weber, Bernhard AU - Weber B FAU - Becker, Wolf-Meinhard AU - Becker WM FAU - Fiebig, Helmut AU - Fiebig H FAU - Cromwell, Oliver AU - Cromwell O LA - eng PT - Journal Article PL - Germany TA - Electrophoresis JT - Electrophoresis JID - 8204476 RN - 0 (Allergens) RN - 0 (PHLPII protein, Phleum pratense) RN - 0 (Plant Proteins) RN - 0 (Protein Isoforms) RN - 0 (Recombinant Proteins) RN - 37341-29-0 (Immunoglobulin E) SB - IM MH - Allergens/analysis/chemistry/*isolation & purification MH - Amino Acid Sequence MH - Antibody Affinity MH - Chromatography, High Pressure Liquid MH - Electrophoresis, Polyacrylamide Gel/*methods MH - Escherichia coli/genetics MH - Immunoglobulin E MH - Molecular Sequence Data MH - Plant Proteins/analysis/chemistry/*isolation & purification MH - Pollen/*immunology MH - Protein Isoforms/chemistry/isolation & purification MH - Recombinant Proteins MH - Sequence Alignment EDAT- 2004/01/20 05:00 MHDA- 2004/09/10 05:00 CRDT- 2004/01/20 05:00 PHST- 2004/01/20 05:00 [pubmed] PHST- 2004/09/10 05:00 [medline] PHST- 2004/01/20 05:00 [entrez] AID - 10.1002/elps.200305697 [doi] PST - ppublish SO - Electrophoresis. 2004 Jan;25(1):14-9. doi: 10.1002/elps.200305697.