PMID- 14744132 OWN - NLM STAT- MEDLINE DCOM- 20040520 LR - 20200401 IS - 0006-2960 (Print) IS - 0006-2960 (Linking) VI - 43 IP - 4 DP - 2004 Feb 3 TI - Solution structure of a CCHHC domain of neural zinc finger factor-1 and its implications for DNA binding. PG - 898-903 AB - The structure of a CCHHC zinc-binding domain from neural zinc finger factor-1 (NZF-1) has been determined in solution though the use of NMR methods. This domain is a member of a family of domains that have the Cys-X(4)-Cys-X(4)-His-X(7)-His-X(5)-Cys consensus sequence. The structure determination reveals a novel fold based around a zinc(II) ion coordinated to three Cys residues and the second of the two conserved His residues. The other His residue is stacked between the metal-coordinated His residue and a relatively conserved aromatic residue. Analysis of His to Gln sequence variants reveals that both His residues are required for the formation of a well-defined structure, but neither is required for high-affinity metal binding at a tetrahedral site. The structure suggests that a two-domain protein fragment and a double-stranded DNA binding site may interact with a common two-fold axis relating the two domains and the two half-sites of the DNA-inverted repeat. FAU - Berkovits-Cymet, Holly J AU - Berkovits-Cymet HJ AD - Department of Biophysics and Biophysical Chemistry, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205, USA. FAU - Amann, Barbara T AU - Amann BT FAU - Berg, Jeremy M AU - Berg JM LA - eng PT - Journal Article PT - Research Support, U.S. Gov't, P.H.S. PL - United States TA - Biochemistry JT - Biochemistry JID - 0370623 RN - 0 (Myt1l protein, rat) RN - 0 (Nerve Tissue Proteins) RN - 0 (Peptide Fragments) RN - 0 (Trans-Activators) RN - 4QD397987E (Histidine) RN - 9007-49-2 (DNA) RN - J41CSQ7QDS (Zinc) RN - K848JZ4886 (Cysteine) SB - IM MH - Amino Acid Motifs/genetics MH - Amino Acid Sequence MH - Animals MH - Binding Sites/genetics MH - Cysteine/chemistry MH - DNA/*chemistry/genetics/*metabolism MH - DNA Mutational Analysis MH - Histidine/chemistry MH - Molecular Sequence Data MH - Nerve Tissue Proteins/*chemistry/genetics/*metabolism MH - Nuclear Magnetic Resonance, Biomolecular MH - Peptide Fragments/chemistry/genetics/metabolism MH - Protein Binding/genetics MH - Protein Structure, Tertiary/genetics MH - Rats MH - Thermodynamics MH - Trans-Activators/*chemistry/genetics/*metabolism MH - Zinc/chemistry MH - *Zinc Fingers/genetics EDAT- 2004/01/28 05:00 MHDA- 2004/05/21 05:00 CRDT- 2004/01/28 05:00 PHST- 2004/01/28 05:00 [pubmed] PHST- 2004/05/21 05:00 [medline] PHST- 2004/01/28 05:00 [entrez] AID - 10.1021/bi035159d [doi] PST - ppublish SO - Biochemistry. 2004 Feb 3;43(4):898-903. doi: 10.1021/bi035159d.