PMID- 15491138 OWN - NLM STAT- MEDLINE DCOM- 20041202 LR - 20131121 IS - 0006-2960 (Print) IS - 0006-2960 (Linking) VI - 43 IP - 42 DP - 2004 Oct 26 TI - Structural studies on a protein-binding zinc-finger domain of Eos reveal both similarities and differences to classical zinc fingers. PG - 13318-27 AB - The oligomerization domain that is present at the C terminus of Ikaros-family proteins and the protein Trps-1 is important for the proper regulation of developmental processes such as hematopoiesis. Remarkably, this domain is predicted to contain two classical zinc fingers (ZnFs), domains normally associated with the recognition of nucleic acids. The preference for protein binding by these predicted ZnFs is not well-understood. We have used a range of methods to gain insight into the structure of this domain. Circular dichroism, UV-vis, and NMR experiments carried out on the C-terminal domain of Eos (EosC) revealed that the two putative ZnFs (C1 and C2) are separable, i.e., capable of folding independently in the presence of Zn(II). We next determined the structure of EosC2 using NMR spectroscopy, revealing that, although the overall fold of EosC2 is similar to other classical ZnFs, a number of differences exist. For example, the conformation of the C terminus of EosC2 appears to be flexible and may result in a major rearrangement of the zinc ligands. Finally, alanine-scanning mutagenesis was used to identify the residues that are involved in the homo- and hetero-oligomerization of Eos, and these results are discussed in the context of the structure of EosC. These studies provide the first structural insights into how EosC mediates protein-protein interactions and contributes to our understanding of why it does not exhibit high-affinity DNA binding. FAU - Westman, Belinda J AU - Westman BJ AD - School of Molecular and Microbial Biosciences, University of Sydney, Sydney, New South Wales 2006, Australia. FAU - Perdomo, Jose AU - Perdomo J FAU - Matthews, Jacqueline M AU - Matthews JM FAU - Crossley, Merlin AU - Crossley M FAU - Mackay, Joel P AU - Mackay JP LA - eng PT - Comparative Study PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Biochemistry JT - Biochemistry JID - 0370623 RN - 0 (Carrier Proteins) RN - 0 (DNA-Binding Proteins) RN - 0 (IKZF1 protein, human) RN - 0 (IKZF5 protein, human) RN - 0 (Nerve Tissue Proteins) RN - 0 (Peptide Fragments) RN - 0 (Protein Isoforms) RN - 0 (Transcription Factors) RN - 0 (Xenopus Proteins) RN - 0 (Zfpn1a1 protein, mouse) RN - 0 (Zfpn1a4 protein, mouse) RN - 148971-36-2 (Ikaros Transcription Factor) RN - J41CSQ7QDS (Zinc) SB - IM MH - Amino Acid Sequence MH - Animals MH - Binding Sites/genetics MH - Carrier Proteins/*chemistry/genetics MH - DNA-Binding Proteins/*chemistry/genetics MH - Humans MH - Ikaros Transcription Factor MH - Mice MH - Models, Molecular MH - Molecular Sequence Data MH - Mutagenesis, Site-Directed MH - Nerve Tissue Proteins/*chemistry/genetics MH - Nuclear Magnetic Resonance, Biomolecular MH - Peptide Fragments/*chemistry/genetics MH - Protein Binding/genetics MH - Protein Conformation MH - Protein Folding MH - Protein Isoforms/chemistry/genetics MH - Protein Structure, Tertiary/genetics MH - Static Electricity MH - Structural Homology, Protein MH - Transcription Factors/*chemistry/genetics MH - Xenopus Proteins/chemistry/genetics MH - Zinc/chemistry MH - *Zinc Fingers/genetics EDAT- 2004/10/20 09:00 MHDA- 2004/12/16 09:00 CRDT- 2004/10/20 09:00 PHST- 2004/10/20 09:00 [pubmed] PHST- 2004/12/16 09:00 [medline] PHST- 2004/10/20 09:00 [entrez] AID - 10.1021/bi049506a [doi] PST - ppublish SO - Biochemistry. 2004 Oct 26;43(42):13318-27. doi: 10.1021/bi049506a.