PMID- 15633635 OWN - NLM STAT- MEDLINE DCOM- 20050126 LR - 20220317 IS - 0379-4172 (Print) IS - 0379-4172 (Linking) VI - 31 IP - 12 DP - 2004 Dec TI - [Expression and promoter methylation of Apaf-1 gene in laryngeal squamous cell carcinoma]. PG - 1327-31 AB - Loss of tumor suppressor genes and apoptosis-associated genes was common event in laryngeal squamous cell carcinoma (LSCC). Apaf-1 (apoptotic protease activating factor-1) is a key factor in cytochrome C-dependent apoptotic pathway. To investigate the effect of Apaf-1 in progression of LSCC, we analyzed Apaf-1 from DNA and RNA levels. Semi-quantitative RT-PCR analysis of Apaf-1 mRNA showed that over 40 percent of LSCCs (11/27) were low expression compared to the para-neoplastic laryngeal tissues (PNTs). The results of CGH indicated loss in 2 of 18 cases but no amplification on chromosome 12q22-23. The LOH frequencies of D12S327, D12S1657, D12S393, D12S1706, D12S346 on 12q22-23 were 18.2%, 13.6%, 18.2%, 22.2% and 16.6%, respectively in 72 matched samples of LSCCs and PNTs. Methylation-specific PCR displayed that all of 11 LSCCs, whose expression of Apaf-1 mRNA down-regulated, were methylated in promoter regions. In contrast, only 1 of 16 LSCCs with no changes in Apaf-1 mRNA levels was methylated (chi2 test, P=0.0001). The results implied that abnormal expression of Apaf-1 participates in the genesis of LSCCs and decreased expression of Apaf-1 mRNA were not mainly due to the deletion of Apaf-1 gene. The Apaf-1 DNA methylation in promoter region might contribute to the decreased transcription of Apaf-1 in LSCCs. FAU - Huang, Dai-Fa AU - Huang DF AD - Department of Medical Genetics, China Medical University, Shenyang 110001, China. FAU - Fu, Wei-Neng AU - Fu WN FAU - Shang, Chao AU - Shang C FAU - Xu, Zhen-Ming AU - Xu ZM FAU - Li, Zeng-Gang AU - Li ZG FAU - Sun, Kai-Lai AU - Sun KL LA - chi PT - English Abstract PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - China TA - Yi Chuan Xue Bao JT - Yi chuan xue bao = Acta genetica Sinica JID - 7900784 RN - 0 (APAF1 protein, human) RN - 0 (Apoptotic Protease-Activating Factor 1) RN - 0 (Proteins) SB - IM MH - Apoptotic Protease-Activating Factor 1 MH - Carcinoma, Squamous Cell/*genetics MH - Chromosomes, Human, Pair 12 MH - CpG Islands MH - *DNA Methylation MH - Humans MH - Laryngeal Neoplasms/*genetics MH - *Promoter Regions, Genetic MH - Proteins/*genetics EDAT- 2005/01/07 09:00 MHDA- 2005/01/27 09:00 CRDT- 2005/01/07 09:00 PHST- 2005/01/07 09:00 [pubmed] PHST- 2005/01/27 09:00 [medline] PHST- 2005/01/07 09:00 [entrez] PST - ppublish SO - Yi Chuan Xue Bao. 2004 Dec;31(12):1327-31.