PMID- 15655077 OWN - NLM STAT- MEDLINE DCOM- 20050208 LR - 20240317 IS - 1471-2350 (Electronic) IS - 1471-2350 (Linking) VI - 6 DP - 2005 Jan 18 TI - Cytogenetic abnormalities and fragile-X syndrome in Autism Spectrum Disorder. PG - 3 AB - BACKGROUND: Autism is a behavioral disorder with impaired social interaction, communication, and repetitive and stereotypic behaviors. About 5-10 % of individuals with autism have 'secondary' autism in which an environmental agent, chromosome abnormality, or single gene disorder can be identified. Ninety percent have idiopathic autism and a major gene has not yet been identified. We have assessed the incidence of chromosome abnormalities and Fragile X syndrome in a population of autistic patients referred to our laboratory. METHODS: Data was analyzed from 433 patients with autistic traits tested using chromosome analysis and/or fluorescence in situ hybridization (FISH) and/or molecular testing for fragile X syndrome by Southern and PCR methods. RESULTS: The median age was 4 years. Sex ratio was 4.5 males to 1 female [354:79]. A chromosome (cs) abnormality was found in 14/421 [3.33 %] cases. The aberrations were: 4/14 [28%] supernumerary markers; 4/14 [28%] deletions; 1/14 [7%] duplication; 3/14 [21%] inversions; 2/14 [14%] translocations. FISH was performed on 23 cases for reasons other than to characterize a previously identified cytogenetic abnormality. All 23 cases were negative. Fragile-X testing by Southern blots and PCR analysis found 7/316 [2.2 %] with an abnormal result. The mutations detected were: a full mutation (fM) and abnormal methylation in 3 [43 %], mosaic mutations with partial methylation of variable clinical significance in 3 [43%] and a permutation carrier [14%]. The frequency of chromosome and fragile-X abnormalities appears to be within the range in reported surveys (cs 4.8-1.7%, FRAX 2-4%). Limitations of our retrospective study include paucity of behavioral diagnostic information, and a specific clinical criterion for testing. CONCLUSIONS: Twenty-eight percent of chromosome abnormalities detected in our study were subtle; therefore a high resolution cytogenetic study with a scrutiny of 15q11.2q13, 2q37 and Xp23.3 region should be standard practice when the indication is autism. The higher incidence of mosaic fragile-X mutations with partial methylation compared to FRAXA positive population [50% vs 15-40%] suggests that faint bands and variations in the Southern band pattern may occur in autistic patients. FAU - Reddy, Kavita S AU - Reddy KS AD - Genzyme Genetics, Orange CA 92868, USA. kavita.reddy@gmail.com LA - eng PT - Journal Article DEP - 20050118 PL - England TA - BMC Med Genet JT - BMC medical genetics JID - 100968552 RN - 0 (FMR1 protein, human) RN - 0 (Nerve Tissue Proteins) RN - 0 (RNA-Binding Proteins) RN - 139135-51-6 (Fragile X Mental Retardation Protein) SB - IM MH - Autistic Disorder/*epidemiology/*genetics MH - Child, Preschool MH - Chromosome Aberrations/*statistics & numerical data MH - Cytogenetic Analysis/*methods MH - Female MH - Fragile X Mental Retardation Protein MH - Fragile X Syndrome/*genetics MH - Humans MH - Male MH - Molecular Epidemiology/methods MH - Mutation/genetics MH - Nerve Tissue Proteins/genetics MH - RNA-Binding Proteins/genetics PMC - PMC548305 EDAT- 2005/01/19 09:00 MHDA- 2005/02/09 09:00 PMCR- 2005/01/18 CRDT- 2005/01/19 09:00 PHST- 2004/08/08 00:00 [received] PHST- 2005/01/18 00:00 [accepted] PHST- 2005/01/19 09:00 [pubmed] PHST- 2005/02/09 09:00 [medline] PHST- 2005/01/19 09:00 [entrez] PHST- 2005/01/18 00:00 [pmc-release] AID - 1471-2350-6-3 [pii] AID - 10.1186/1471-2350-6-3 [doi] PST - epublish SO - BMC Med Genet. 2005 Jan 18;6:3. doi: 10.1186/1471-2350-6-3.