PMID- 15691913 OWN - NLM STAT- MEDLINE DCOM- 20050428 LR - 20191210 IS - 0099-2240 (Print) IS - 1098-5336 (Electronic) IS - 0099-2240 (Linking) VI - 71 IP - 2 DP - 2005 Feb TI - Isotope labeling and microautoradiography of active heterotrophic bacteria on the basis of assimilation of 14CO(2). PG - 646-55 AB - Most heterotrophic bacteria assimilate CO(2) in various carboxylation reactions during biosynthesis. In this study, assimilation of (14)CO(2) by heterotrophic bacteria was used for isotope labeling of active microorganisms in pure cultures and environmental samples. Labeled cells were visualized by microautoradiography (MAR) combined with fluorescence in situ hybridization (FISH) to obtain simultaneous information about activity and identity. Cultures of Escherichia coli and Pseudomonas putida assimilated sufficient (14)CO(2) during growth on various organic substrates to obtain positive MAR signals. The MAR signals were comparable with the traditional MAR approach based on uptake of (14)C-labeled organic substrates. Experiments with E. coli showed that (14)CO(2) was assimilated during both fermentation and aerobic and anaerobic respiration. The new MAR approach, HetCO(2)-MAR, was evaluated by targeting metabolic active filamentous bacteria, including "Candidatus Microthrix parvicella" in activated sludge. "Ca. Microthrix parvicella" was able to take up oleic acid under anaerobic conditions, as shown by the traditional MAR approach with [(14)C]oleic acid. However, the new HetCO(2)-MAR approach indicated that "Ca. Microthrix parvicella," did not significantly grow on oleic acid under anaerobic conditions with or without addition of NO(2)(-), whereas the addition of O(2) or NO(3)(-) initiated growth, as indicated by detectable (14)CO(2) assimilation. This is a metabolic feature that has not been described previously for filamentous bacteria. Such information could not have been derived by using the traditional MAR procedure, whereas the new HetCO(2)-MAR approach differentiates better between substrate uptake and substrate metabolism that result in growth. The HetCO(2)-MAR results were supported by stable isotope analysis of (13)C-labeled phospholipid fatty acids from activated sludge incubated under aerobic and anaerobic conditions in the presence of (13)CO(2). In conclusion, the novel HetCO(2)-MAR approach expands the possibility for studies of the ecophysiology of uncultivated microorganisms. FAU - Hesselsoe, Martin AU - Hesselsoe M AD - Department of Life Sciences, Aalborg University, Sohngaardsholmsvej 57, DK-9000 Aalborg, Denmark. FAU - Nielsen, Jeppe Lund AU - Nielsen JL FAU - Roslev, Peter AU - Roslev P FAU - Nielsen, Per Halkjaer AU - Nielsen PH LA - eng PT - Evaluation Study PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Appl Environ Microbiol JT - Applied and environmental microbiology JID - 7605801 RN - 0 (Carbon Isotopes) RN - 0 (Carbon Radioisotopes) RN - 0 (Culture Media) RN - 0 (Fatty Acids) RN - 0 (Sewage) RN - 142M471B3J (Carbon Dioxide) SB - IM MH - Actinobacteria/cytology/growth & development/metabolism MH - Autoradiography/methods MH - Bacteria/cytology/growth & development/*metabolism MH - Bacteriological Techniques MH - Carbon Dioxide/*metabolism MH - Carbon Isotopes/metabolism MH - Carbon Radioisotopes/metabolism MH - Culture Media MH - Escherichia coli/growth & development/metabolism MH - Fatty Acids/analysis MH - Isotope Labeling/*methods MH - Pseudomonas putida/growth & development/metabolism MH - Sewage/microbiology PMC - PMC546759 EDAT- 2005/02/05 09:00 MHDA- 2005/04/29 09:00 PMCR- 2005/02/01 CRDT- 2005/02/05 09:00 PHST- 2005/02/05 09:00 [pubmed] PHST- 2005/04/29 09:00 [medline] PHST- 2005/02/05 09:00 [entrez] PHST- 2005/02/01 00:00 [pmc-release] AID - 71/2/646 [pii] AID - 1301-04 [pii] AID - 10.1128/AEM.71.2.646-655.2005 [doi] PST - ppublish SO - Appl Environ Microbiol. 2005 Feb;71(2):646-55. doi: 10.1128/AEM.71.2.646-655.2005.