PMID- 15919591 OWN - NLM STAT- MEDLINE DCOM- 20050922 LR - 20071114 IS - 0531-5565 (Print) IS - 0531-5565 (Linking) VI - 40 IP - 5 DP - 2005 May TI - Contribution of de novo point mutations to the overall mutational burden in mitochondrial DNA of adult rats. PG - 396-402 AB - This study analyzed the incidence of point mutations in mitochondrial DNA of brain and muscle tissues from young (6-month) and old (24-month) male F344 rats. Coding sequence mutations in subunit 5 of the NADH dehydrogenase gene were detected after high-fidelity PCR amplification and cloning by denaturing gradient gel electrophoresis (DGGE) assay followed by sequencing of detected mutants. In total, almost a thousand individual clones were analyzed both in brain and muscle samples. On average, mtDNA from brain tissue showed a 66% increase with age in mutation frequencies (2.3+/-1.9 vs. 3.8+/-4.5 x 10(-4) mutations/bp, mean+/-SD), which failed to reach statistical significance (p=0.45). Muscle tissues yielded substantially fewer mutants with average mutant frequencies for both young and old rats almost 10 times lower than the corresponding values in the brain tissue (0.3+/-0.4 and 0.5+/-0.6 x 10(-4), respectively). The difference in mutation accumulation between muscle and brain was highly significant in both the younger group (Chi-squared=9.7, p < or = 0.01) and in older animals (Chi-squared=10.9, p < or = 0.001). Molecular analysis of the mutated sequences revealed that almost half were identical sequences recurring in different samples and tissues. Our findings indicate that the process of mutation accumulation in mitochondria begins in the germ-line and/or during earlier stages of life, contributing up to half of the total mutational burden, whereas de novo spontaneous formation of point mutations in adulthood is far less than was anticipated. FAU - Khaidakov, M AU - Khaidakov M AD - Department of Geriatrics, University of Arkansas for Medical Sciences, John McClellan VA Hospital, 4300 West 7th Street, Little Rock, AR 72205, USA. khaidakovmagomed@uams.edu FAU - Chavannes-Turesky, N AU - Chavannes-Turesky N FAU - Cooney, C A AU - Cooney CA FAU - Dupont-Versteegden, E E AU - Dupont-Versteegden EE FAU - Kennedy, R H AU - Kennedy RH FAU - Siegel, E R AU - Siegel ER FAU - Khaidakova, G AU - Khaidakova G FAU - Shmookler Reis, R J AU - Shmookler Reis RJ LA - eng GR - P01AG20641/AG/NIA NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't PT - Research Support, U.S. Gov't, P.H.S. DEP - 20050328 PL - England TA - Exp Gerontol JT - Experimental gerontology JID - 0047061 RN - 0 (DNA Transposable Elements) RN - 0 (DNA, Mitochondrial) SB - IM MH - Aging/genetics MH - Animals MH - Cerebral Cortex/physiology MH - DNA Mutational Analysis/methods MH - DNA Transposable Elements/genetics MH - DNA, Mitochondrial/*genetics MH - Electrophoresis/methods MH - Male MH - Muscle, Skeletal/physiology MH - Plasmids/genetics MH - Point Mutation/*genetics MH - Rats MH - Rats, Inbred F344 EDAT- 2005/05/28 09:00 MHDA- 2005/09/24 09:00 CRDT- 2005/05/28 09:00 PHST- 2004/11/17 00:00 [received] PHST- 2005/02/10 00:00 [revised] PHST- 2005/02/16 00:00 [accepted] PHST- 2005/05/28 09:00 [pubmed] PHST- 2005/09/24 09:00 [medline] PHST- 2005/05/28 09:00 [entrez] AID - S0531-5565(05)00030-6 [pii] AID - 10.1016/j.exger.2005.02.007 [doi] PST - ppublish SO - Exp Gerontol. 2005 May;40(5):396-402. doi: 10.1016/j.exger.2005.02.007. Epub 2005 Mar 28.