PMID- 15928962 OWN - NLM STAT- MEDLINE DCOM- 20060206 LR - 20220408 IS - 0040-5752 (Print) IS - 0040-5752 (Linking) VI - 111 IP - 4 DP - 2005 Aug TI - Identification and confirmation of three neutral alleles conferring wide compatibility in inter-subspecific hybrids of rice (Oryza sativa L.) using near-isogenic lines. PG - 702-10 AB - Wide-compatibility varieties (WCVs) are a special class of rice germplasm that is able to produce fertile hybrids when crossed to both indica and japonica subspecies. Previous studies determined 'Dular' and 02428 as two WCVs and identified a number of QTLs as having large effects on fertility of inter-subspecific hybrids. In this study, we developed five near-isogenic lines (NILs) for three of the QTLs, f5, f6 and S5, by backcrossing and marker-assisted selection, using "Dular" and 02428 as the donors and "Zhenshan 97" as the recipient. Three of the NILs each carried one introgressed allele, and two NILs each carried two introgressed alleles in combinations. The NILs were testcrossed to an indica tester "Nanjing 11" and a japonica tester "Balilla". The results showed that the f5 allele from "Dular"(f5-Du) is a neutral allele conferring wide compatibility, with a large effect on both pollen and spikelet fertility, and the f6 allele from "Dular" (f6-Du) is a neutral allele for spikelet fertility with smaller effect. The S5 allele from 02428 (S5-08) was confirmed to be a neutral allele for spikelet fertility. It is likely that f6 and S5 are the same locus as deduced by their genomic locations and effects. The results also showed that even in combination, two neutral alleles of different loci were not able to produce normal fertility hybrids in typical indica-japonica crosses. The implications of the findings in rice breeding programs are discussed. FAU - Wang, G W AU - Wang GW AD - National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan 430070, China. FAU - He, Y Q AU - He YQ FAU - Xu, C G AU - Xu CG FAU - Zhang, Qifa AU - Zhang Q LA - eng PT - Comparative Study PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20050601 PL - Germany TA - Theor Appl Genet JT - TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik JID - 0145600 SB - IM MH - *Alleles MH - Breeding/methods MH - Crosses, Genetic MH - *Hybridization, Genetic MH - Microsatellite Repeats MH - Oryza/*genetics MH - Pollen/cytology MH - *Quantitative Trait Loci MH - Reproduction/genetics EDAT- 2005/06/02 09:00 MHDA- 2006/02/07 09:00 CRDT- 2005/06/02 09:00 PHST- 2005/02/17 00:00 [received] PHST- 2005/04/22 00:00 [accepted] PHST- 2005/06/02 09:00 [pubmed] PHST- 2006/02/07 09:00 [medline] PHST- 2005/06/02 09:00 [entrez] AID - 10.1007/s00122-005-2055-z [doi] PST - ppublish SO - Theor Appl Genet. 2005 Aug;111(4):702-10. doi: 10.1007/s00122-005-2055-z. Epub 2005 Jun 1.