PMID- 15965612 OWN - NLM STAT- MEDLINE DCOM- 20090909 LR - 20181113 IS - 1572-994X (Electronic) IS - 0920-8569 (Linking) VI - 31 IP - 1 DP - 2005 Aug TI - Identification of a novel B cell epitope on the nucleocapsid protein of porcine reproductive and respiratory syndrome virus by phage display. PG - 81-7 AB - A phage display peptide library targeting the nucleocapsid (N) protein of porcine reproductive and respiratory syndrome virus (PRRSV) strain CH-1a was generated and used for epitope mapping. After 3 rounds of biopanning with the monoclonal antibody (MAb) N3H2 directed against the N protein, 3 positive phages were screened and sequenced. These phages share a consensus sequence, IQTAFNQGA, which corresponds to the amino acid (AA) 79-87 segment of the CH-1a N protein. A small DNA fragment coding for IQTAFNQGA was expressed as a fusion product, and reacted to N3H2 in Western blots and indirect ELISA. Four truncated peptides (IQTAFNQG, IQTAFNQ, QTAFNQGA, and TAFNQGA) expressed as GST fusion products failed to react with N3H2. The sequences around the N3H2-binding site among the N proteins of 57 PRRSV strains were compared. Our results indicate that the IQTAFNQGA motif is highly conserved among North American and European isolates. We concluded that the precisely defined nona-peptide epitope is a novel conserved Linear B cell epitope on the N protein of PRRSV. FAU - An, Tong-Qing AU - An TQ AD - National Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, CAAS, 427 Maduan Street, 150001, Harbin, People's Republic of China. FAU - Zhou, Yan-Jun AU - Zhou YJ FAU - Qiu, Hua-Ji AU - Qiu HJ FAU - Tong, Guang-Zhi AU - Tong GZ FAU - Wang, Yun-Feng AU - Wang YF FAU - Liu, Jin-Xia AU - Liu JX FAU - Yang, Jin-Yu AU - Yang JY LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Virus Genes JT - Virus genes JID - 8803967 RN - 0 (Epitopes, B-Lymphocyte) RN - 0 (Nucleocapsid Proteins) RN - 0 (Peptide Library) SB - IM MH - Amino Acid Sequence MH - Animals MH - Epitopes, B-Lymphocyte/chemistry/*genetics/immunology MH - Mice MH - Mice, Inbred BALB C MH - Molecular Sequence Data MH - Nucleocapsid Proteins/chemistry/genetics/*immunology MH - *Peptide Library MH - Porcine Reproductive and Respiratory Syndrome/immunology/*virology MH - Porcine respiratory and reproductive syndrome virus/chemistry/*genetics/*immunology MH - Sequence Alignment EDAT- 2005/06/21 09:00 MHDA- 2009/09/10 06:00 CRDT- 2005/06/21 09:00 PHST- 2004/11/07 00:00 [received] PHST- 2005/01/25 00:00 [accepted] PHST- 2005/01/25 00:00 [revised] PHST- 2005/06/21 09:00 [pubmed] PHST- 2009/09/10 06:00 [medline] PHST- 2005/06/21 09:00 [entrez] AID - 10.1007/s11262-005-2203-1 [doi] PST - ppublish SO - Virus Genes. 2005 Aug;31(1):81-7. doi: 10.1007/s11262-005-2203-1.