PMID- 16222686 OWN - NLM STAT- MEDLINE DCOM- 20060510 LR - 20200930 IS - 1552-4825 (Print) IS - 1552-4825 (Linking) VI - 139 IP - 1 DP - 2005 Nov 15 TI - Detection of cryptic chromosome aberrations in a patient with a balanced t(1;9)(p34.2;p24) by array-based comparative genomic hybridization. PG - 32-6 AB - Mental retardation (MR) is one of the most common phenotypes in congenital disorders, but in many cases the pathogenesis remains unknown. Here, we report on a 5-year-old boy with mild developmental disability, cranial malformation, minor anomalies, and moderate MR. G-banded chromosome analysis revealed that he carried an apparent balanced translocation, t(1;9)(p34.2;p24). However, our array-based comparative genomic hybridization (CGH-array) analysis detected a cryptic genomic duplication and a deletion at the breakpoints. Further fluorescence in situ hybridization (FISH) showed that the duplication was approximately 7.9 Mb in size at 1p34.3-p33, and the deletion was 4 Mb at 9pter-p24. Although some features of the patient were consistent with those of monosomy 9p-syndrome, his features were not typical of cases of the syndrome, suggesting that the small deletion region involved in 9p may limit his phenotype. On the other hand, interstitial duplication at 1p34.3-p33 is very rare and his phenotype did not match with that in previous reports. CGH-array is a potentially useful technique for investigating cryptic copy-number alterations in cases of apparently balanced chromosome rearrangements in patients with unexpected clinical features. FAU - Hayashi, Shin AU - Hayashi S AD - Department of Molecular Cytogenetics, Medical Research Institute and School of Biomedical Science, Tokyo Medical and Dental University, Tokyo, Japan. FAU - Kurosawa, Kenji AU - Kurosawa K FAU - Imoto, Issei AU - Imoto I FAU - Mizutani, Shuki AU - Mizutani S FAU - Inazawa, Johji AU - Inazawa J LA - eng PT - Case Reports PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Am J Med Genet A JT - American journal of medical genetics. Part A JID - 101235741 SB - IM MH - Abnormalities, Multiple/genetics MH - Child, Preschool MH - *Chromosome Aberrations MH - *Chromosome Deletion MH - Chromosome Mapping MH - Chromosomes, Artificial, Bacterial MH - *Chromosomes, Human, Pair 1 MH - *Chromosomes, Human, Pair 9 MH - Gene Duplication MH - Humans MH - In Situ Hybridization, Fluorescence MH - Intellectual Disability/genetics MH - Male MH - Nucleic Acid Hybridization/methods MH - Oligonucleotide Array Sequence Analysis MH - *Translocation, Genetic EDAT- 2005/10/14 09:00 MHDA- 2006/05/11 09:00 CRDT- 2005/10/14 09:00 PHST- 2005/10/14 09:00 [pubmed] PHST- 2006/05/11 09:00 [medline] PHST- 2005/10/14 09:00 [entrez] AID - 10.1002/ajmg.a.30982 [doi] PST - ppublish SO - Am J Med Genet A. 2005 Nov 15;139(1):32-6. doi: 10.1002/ajmg.a.30982.