PMID- 16597990
OWN - NLM
STAT- MEDLINE
DCOM- 20060628
LR  - 20220330
IS  - 0099-2240 (Print)
IS  - 1098-5336 (Electronic)
IS  - 0099-2240 (Linking)
VI  - 72
IP  - 4
DP  - 2006 Apr
TI  - Molecular characterization of subject-specific oral microflora during initial 
      colonization of enamel.
PG  - 2837-48
AB  - The initial microbial colonization of tooth surfaces is a repeatable and 
      selective process, with certain bacterial species predominating in the nascent 
      biofilm. Characterization of the initial microflora is the first step in 
      understanding interactions among community members that shape ensuing biofilm 
      development. Using molecular methods and a retrievable enamel chip model, we 
      characterized the microbial diversity of early dental biofilms in three subjects. 
      A total of 531 16S rRNA gene sequences were analyzed, and 97 distinct phylotypes 
      were identified. Microbial community composition was shown to be statistically 
      different among subjects. In all subjects, however, 4-h and 8-h communities were 
      dominated by Streptococcus spp. belonging to the Streptococcus 
      oralis/Streptococcus mitis group. Other frequently observed genera (comprising at 
      least 5% of clone sequences in at least one of the six clone libraries) were 
      Actinomyces, Gemella, Granulicatella, Neisseria, Prevotella, Rothia, and 
      Veillonella. Fluorescence in situ hybridization (FISH) confirmed that the 
      proportion of Streptococcus sp. sequences in the clone libraries coincided with 
      the proportion of streptococcus probe-positive organisms on the chip. FISH also 
      revealed that, in the undisturbed plaque, not only Streptococcus spp. but also 
      the rarer Prevotella spp. were usually seen in small multigeneric clusters of 
      cells. This study shows that the initial dental plaque community of each subject 
      is unique in terms of diversity and composition. Repetitive and distinctive 
      community composition within subjects suggests that the spatiotemporal 
      interactions and ecological shifts that accompany biofilm maturation also occur 
      in a subject-dependent manner.
FAU - Diaz, Patricia I
AU  - Diaz PI
AD  - Oral Infection and Immunity Branch, National Institute of Dental and Craniofacial 
      Research, National Institutes of Health, Building 30, Room 310, 30 Convent Dr., 
      Bethesda, MD 20892-4350, USA.
FAU - Chalmers, Natalia I
AU  - Chalmers NI
FAU - Rickard, Alexander H
AU  - Rickard AH
FAU - Kong, Colin
AU  - Kong C
FAU - Milburn, Craig L
AU  - Milburn CL
FAU - Palmer, Robert J Jr
AU  - Palmer RJ Jr
FAU - Kolenbrander, Paul E
AU  - Kolenbrander PE
LA  - eng
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GR  - Intramural NIH HHS/United States
PT  - Journal Article
PT  - Research Support, N.I.H., Intramural
PL  - United States
TA  - Appl Environ Microbiol
JT  - Applied and environmental microbiology
JID - 7605801
RN  - 0 (DNA, Bacterial)
RN  - 0 (DNA, Ribosomal)
RN  - 0 (RNA, Ribosomal, 16S)
SB  - IM
MH  - Actinomyces/genetics/isolation & purification
MH  - Bacteria/*classification/*genetics/isolation & purification
MH  - Biofilms/growth & development
MH  - DNA, Bacterial/analysis
MH  - DNA, Ribosomal/analysis
MH  - Dental Enamel/*microbiology
MH  - Humans
MH  - In Situ Hybridization, Fluorescence
MH  - Models, Biological
MH  - Molecular Sequence Data
MH  - Phylogeny
MH  - RNA, Ribosomal, 16S/genetics
MH  - Reproducibility of Results
MH  - Sequence Analysis, DNA
MH  - Streptococcus/genetics/isolation & purification
MH  - Time Factors
PMC - PMC1449052
EDAT- 2006/04/07 09:00
MHDA- 2006/06/29 09:00
PMCR- 2006/08/01
CRDT- 2006/04/07 09:00
PHST- 2006/04/07 09:00 [pubmed]
PHST- 2006/06/29 09:00 [medline]
PHST- 2006/04/07 09:00 [entrez]
PHST- 2006/08/01 00:00 [pmc-release]
AID - 72/4/2837 [pii]
AID - 1867-05 [pii]
AID - 10.1128/AEM.72.4.2837-2848.2006 [doi]
PST - ppublish
SO  - Appl Environ Microbiol. 2006 Apr;72(4):2837-48. doi: 
      10.1128/AEM.72.4.2837-2848.2006.