PMID- 16625419
OWN - NLM
STAT- MEDLINE
DCOM- 20071025
LR  - 20211020
IS  - 1436-2228 (Print)
IS  - 1436-2228 (Linking)
VI  - 8
IP  - 2
DP  - 2006 Mar-Apr
TI  - Development of expressed sequence tags from the bay scallop, Argopecten irradians 
      irradians.
PG  - 161-9
AB  - The bay scallop, Argopecten irradians irradians, introduced from North America, 
      has become one of the most important aquaculture species in China. Inan effort to 
      identify scallop genes involved in host defense, a high-quality cDNA library was 
      constructed from whole body tissues of the bay scallop. A total of 5828 
      successful sequencing reactions yielded 4995 expressed sequence tags (ESTs) 
      longer than 100 bp. Cluster and assembly analyses of the ESTs identified 637 
      contigs (consisting of 2853 sequences) and 2142 singletons, totaling 2779 unique 
      sequences. Basic Local Alignment Search Tool (BLAST) analysis showed that the 
      majority (73%) of the unique sequences had no significant homology (E-value </= 
      0.005) to sequences in GenBank. Among the 748 sequences with significant GenBank 
      matches, 160 (21.4%) were for genes related to metabolism, 131 (17.5%) for 
      cell/organism defense, 124 (16.6%) for gene/protein expression, 83 (11.1%) for 
      cell structure/motility, 70 (9.4%) for cell signaling/communication, 17 (2.3%) 
      for cell division, and 163 (21.8%) matched to genes of unknown functions. The 
      list of host-defense genes included many genes with known and important roles in 
      innate defense such as lectins, defensins, proteases, protease inhibitors, heat 
      shock proteins, antioxidants, and Toll-like receptors. The study provides a 
      significant number of ESTs for gene discovery and candidate genes for studying 
      host defense in scallops and other molluscs.
FAU - Song, Linsheng
AU  - Song L
AD  - Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, P. R. 
      China.
FAU - Xu, Wei
AU  - Xu W
FAU - Li, Chenhua
AU  - Li C
FAU - Li, Honglei
AU  - Li H
FAU - Wu, Longtao
AU  - Wu L
FAU - Xiang, Jianhai
AU  - Xiang J
FAU - Guo, Ximing
AU  - Guo X
LA  - eng
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SI  - GENBANK/CB412867
SI  - GENBANK/CB412868
SI  - GENBANK/CB412869
SI  - GENBANK/CB412870
SI  - GENBANK/CB412871
SI  - GENBANK/CB412872
SI  - GENBANK/CB412873
SI  - GENBANK/CB412874
SI  - GENBANK/CB412875
SI  - GENBANK/CB412876
SI  - GENBANK/CB412877
SI  - GENBANK/CB412878
SI  - GENBANK/CB412879
SI  - GENBANK/CB412880
SI  - GENBANK/CB412881
SI  - GENBANK/CB412882
SI  - GENBANK/CB412883
SI  - GENBANK/CB412884
SI  - GENBANK/CB412885
SI  - GENBANK/CB412886
SI  - GENBANK/CB412887
SI  - GENBANK/CB412888
SI  - GENBANK/CB412889
SI  - GENBANK/CB412890
SI  - GENBANK/CB412891
SI  - GENBANK/CB412892
SI  - GENBANK/CB412893
SI  - GENBANK/CB412894
SI  - GENBANK/CB412895
SI  - GENBANK/CB412896
SI  - GENBANK/CB412897
SI  - GENBANK/CB412898
SI  - GENBANK/CB412899
SI  - GENBANK/CB412900
SI  - GENBANK/CB412901
SI  - GENBANK/CB412902
SI  - GENBANK/CB412903
SI  - GENBANK/CB412904
SI  - GENBANK/CB412905
SI  - GENBANK/CB412906
SI  - GENBANK/CB412907
SI  - GENBANK/CB412908
SI  - GENBANK/CB412909
SI  - GENBANK/CB412910
SI  - GENBANK/CB412911
SI  - GENBANK/CB412912
SI  - GENBANK/CB412913
SI  - GENBANK/CB412914
SI  - GENBANK/CB412915
SI  - GENBANK/CB412916
SI  - GENBANK/CB412917
SI  - GENBANK/CB412918
SI  - GENBANK/CB412919
SI  - GENBANK/CB412920
SI  - GENBANK/CB412921
SI  - GENBANK/CB412922
SI  - GENBANK/CB412923
SI  - GENBANK/CB412924
SI  - GENBANK/CB412925
SI  - GENBANK/CB412926
SI  - GENBANK/CB412927
SI  - GENBANK/CB412928
SI  - GENBANK/CB412929
SI  - GENBANK/CB412930
SI  - GENBANK/CB412931
SI  - GENBANK/CB412932
SI  - GENBANK/CB412933
SI  - GENBANK/CB412934
SI  - GENBANK/CB412935
SI  - GENBANK/CB412936
SI  - GENBANK/CB412937
SI  - GENBANK/CB412938
SI  - GENBANK/CB412939
SI  - GENBANK/CB412940
SI  - GENBANK/CB412941
SI  - GENBANK/CB412942
SI  - GENBANK/CB412943
SI  - GENBANK/CB412944
SI  - GENBANK/CB412945
SI  - GENBANK/CB412946
SI  - GENBANK/CB412947
SI  - GENBANK/CB412948
SI  - GENBANK/CB412949
SI  - GENBANK/CB412950
SI  - GENBANK/CB412951
SI  - GENBANK/CB412952
SI  - GENBANK/CB412953
SI  - GENBANK/CB412954
SI  - GENBANK/CB412955
SI  - GENBANK/CB412956
SI  - GENBANK/CB412957
SI  - GENBANK/CB412958
SI  - GENBANK/CB412959
SI  - GENBANK/CB412960
SI  - GENBANK/CB412961
SI  - GENBANK/CB412962
SI  - GENBANK/CB412963
SI  - GENBANK/CB412964
SI  - GENBANK/CB412965
SI  - GENBANK/CB412966
SI  - GENBANK/CB412967
SI  - GENBANK/CB412968
SI  - GENBANK/CB412969
SI  - GENBANK/CB412970
SI  - GENBANK/CB412971
SI  - GENBANK/CB412972
SI  - GENBANK/CB412973
SI  - GENBANK/CB412974
SI  - GENBANK/CB412975
SI  - GENBANK/CB412976
SI  - GENBANK/CB412977
SI  - GENBANK/CB412978
SI  - GENBANK/CB412979
SI  - GENBANK/CB412980
SI  - GENBANK/CB412981
SI  - GENBANK/CB412982
SI  - GENBANK/CB412983
SI  - GENBANK/CB412984
SI  - GENBANK/CB412985
SI  - GENBANK/CB412986
SI  - GENBANK/CB412987
SI  - GENBANK/CB412988
SI  - GENBANK/CB412989
SI  - GENBANK/CB412990
SI  - GENBANK/CB412991
SI  - GENBANK/CB412992
SI  - GENBANK/CB412993
SI  - GENBANK/CB412994
SI  - GENBANK/CB412995
SI  - GENBANK/CB412996
SI  - GENBANK/CB412997
SI  - GENBANK/CB412998
SI  - GENBANK/CB412999
SI  - GENBANK/CB413000
SI  - GENBANK/CB413001
SI  - GENBANK/CB413002
SI  - GENBANK/CB413003
SI  - GENBANK/CB413004
SI  - GENBANK/CB413005
SI  - GENBANK/CB413006
SI  - GENBANK/CB413007
SI  - GENBANK/CB413008
SI  - GENBANK/CB413009
SI  - GENBANK/CB413010
SI  - GENBANK/CB413011
SI  - GENBANK/CB413012
SI  - GENBANK/CB413013
SI  - GENBANK/CB413014
SI  - GENBANK/CB413015
SI  - GENBANK/CB413016
SI  - GENBANK/CB413017
SI  - GENBANK/CB413018
SI  - GENBANK/CB413019
SI  - GENBANK/CB413020
SI  - GENBANK/CB413021
SI  - GENBANK/CB413022
SI  - GENBANK/CB413023
SI  - GENBANK/CB413024
SI  - GENBANK/CB413025
SI  - GENBANK/CB413026
SI  - GENBANK/CB413027
SI  - GENBANK/CB413028
SI  - GENBANK/CB413029
SI  - GENBANK/CB413030
SI  - GENBANK/CB413031
SI  - GENBANK/CB413032
SI  - GENBANK/CB413033
SI  - GENBANK/CB413034
SI  - GENBANK/CB413035
SI  - GENBANK/CB413036
SI  - GENBANK/CB413037
SI  - GENBANK/CB413038
SI  - GENBANK/CB413039
SI  - GENBANK/CB413040
SI  - GENBANK/CB413041
SI  - GENBANK/CB413042
SI  - GENBANK/CB413043
SI  - GENBANK/CB413044
SI  - GENBANK/CB413045
SI  - GENBANK/CB413046
SI  - GENBANK/CB413047
SI  - GENBANK/CB413048
SI  - GENBANK/CB413049
SI  - GENBANK/CB413050
SI  - GENBANK/CB413051
SI  - GENBANK/CB413052
SI  - GENBANK/CB413053
SI  - GENBANK/CB413054
SI  - GENBANK/CB413055
SI  - GENBANK/CB413056
SI  - GENBANK/CB413057
SI  - GENBANK/CB413058
SI  - GENBANK/CB413059
SI  - GENBANK/CB413060
SI  - GENBANK/CB413061
SI  - GENBANK/CB413062
SI  - GENBANK/CB413063
SI  - GENBANK/CB413064
SI  - GENBANK/CB413065
SI  - GENBANK/CB413066
SI  - GENBANK/CB413067
SI  - GENBANK/CB413068
SI  - GENBANK/CB413069
SI  - GENBANK/CB413070
SI  - GENBANK/CB413071
SI  - GENBANK/CB413072
SI  - GENBANK/CB413073
SI  - GENBANK/CB413074
SI  - GENBANK/CB413075
SI  - GENBANK/CB413076
SI  - GENBANK/CB413077
SI  - GENBANK/CB413078
SI  - GENBANK/CB413079
SI  - GENBANK/CB413080
SI  - GENBANK/CB413081
SI  - GENBANK/CB413082
SI  - GENBANK/CB413083
SI  - GENBANK/CB413084
SI  - GENBANK/CB413085
SI  - GENBANK/CB413086
SI  - GENBANK/CB413087
SI  - GENBANK/CB413088
SI  - GENBANK/CB413089
SI  - GENBANK/CB413090
SI  - GENBANK/CB413091
SI  - GENBANK/CB413092
SI  - GENBANK/CB413093
SI  - GENBANK/CB413094
SI  - GENBANK/CB413095
SI  - GENBANK/CB413096
SI  - GENBANK/CB413097
SI  - GENBANK/CB413098
SI  - GENBANK/CB413099
SI  - GENBANK/CB413100
SI  - GENBANK/CB413101
SI  - GENBANK/CB413102
SI  - GENBANK/CB413103
SI  - GENBANK/CB413104
SI  - GENBANK/CB413105
SI  - GENBANK/CB413106
SI  - GENBANK/CB413107
SI  - GENBANK/CB413108
SI  - GENBANK/CB413109
SI  - GENBANK/CB413110
SI  - GENBANK/CB413111
SI  - GENBANK/CB413112
SI  - GENBANK/CB413113
SI  - GENBANK/CB413114
SI  - GENBANK/CB413115
SI  - GENBANK/CB413116
SI  - GENBANK/CB413117
SI  - GENBANK/CB413118
SI  - GENBANK/CB413119
SI  - GENBANK/CB413120
SI  - GENBANK/CB413121
SI  - GENBANK/CB413122
SI  - GENBANK/CB413123
SI  - GENBANK/CB413124
SI  - GENBANK/CB413125
SI  - GENBANK/CB413126
SI  - GENBANK/CB413127
SI  - GENBANK/CB413128
SI  - GENBANK/CB413129
SI  - GENBANK/CB413130
SI  - GENBANK/CB413131
SI  - GENBANK/CB413132
SI  - GENBANK/CB413133
SI  - GENBANK/CB413134
SI  - GENBANK/CB413135
SI  - GENBANK/CB413136
SI  - GENBANK/CB413137
SI  - GENBANK/CB413138
SI  - GENBANK/CB413139
SI  - GENBANK/CB413140
SI  - GENBANK/CB413141
SI  - GENBANK/CB413142
SI  - GENBANK/CB413143
SI  - GENBANK/CB413144
SI  - GENBANK/CB413145
SI  - GENBANK/CB413146
SI  - GENBANK/CB413147
SI  - GENBANK/CB413148
SI  - GENBANK/CB413149
SI  - GENBANK/CB413150
SI  - GENBANK/CB413151
SI  - GENBANK/CB413152
SI  - GENBANK/CB413153
SI  - GENBANK/CB413154
SI  - GENBANK/CB413155
SI  - GENBANK/CB413156
SI  - GENBANK/CB413157
SI  - GENBANK/CB413158
SI  - GENBANK/CB413159
SI  - GENBANK/CB413160
SI  - GENBANK/CB413161
SI  - GENBANK/CB413162
SI  - GENBANK/CB413163
SI  - GENBANK/CB413164
SI  - GENBANK/CB413165
SI  - GENBANK/CB413166
SI  - GENBANK/CB413167
SI  - GENBANK/CB413168
SI  - GENBANK/CB413169
SI  - GENBANK/CB413170
SI  - GENBANK/CB413171
SI  - GENBANK/CB413172
SI  - GENBANK/CB413173
SI  - GENBANK/CB413174
SI  - GENBANK/CB413175
SI  - GENBANK/CB413176
SI  - GENBANK/CB413177
SI  - GENBANK/CB413178
SI  - GENBANK/CB413179
SI  - GENBANK/CB413180
SI  - GENBANK/CB413181
SI  - GENBANK/CB413182
SI  - GENBANK/CB413183
SI  - GENBANK/CB413184
SI  - GENBANK/CB413185
SI  - GENBANK/CB413186
SI  - GENBANK/CB413187
SI  - GENBANK/CB413188
SI  - GENBANK/CB413189
SI  - GENBANK/CB413190
SI  - GENBANK/CB413191
SI  - GENBANK/CB413192
SI  - GENBANK/CB413193
SI  - GENBANK/CB413194
SI  - GENBANK/CB413195
SI  - GENBANK/CB413196
SI  - GENBANK/CB413197
SI  - GENBANK/CB413198
SI  - GENBANK/CB413199
SI  - GENBANK/CB413200
SI  - GENBANK/CB413201
SI  - GENBANK/CB413202
SI  - GENBANK/CB413203
SI  - GENBANK/CB413204
SI  - GENBANK/CB413205
SI  - GENBANK/CB413206
SI  - GENBANK/CB413207
SI  - GENBANK/CB413208
SI  - GENBANK/CB413209
SI  - GENBANK/CB413210
SI  - GENBANK/CB413211
SI  - GENBANK/CB413212
SI  - GENBANK/CB413213
SI  - GENBANK/CB413214
SI  - GENBANK/CB413215
SI  - GENBANK/CB413216
SI  - GENBANK/CB413217
SI  - GENBANK/CB413218
SI  - GENBANK/CB413219
SI  - GENBANK/CB413220
SI  - GENBANK/CB413221
SI  - GENBANK/CB413222
SI  - GENBANK/CB413223
SI  - GENBANK/CB413224
SI  - GENBANK/CB413225
SI  - GENBANK/CB413226
SI  - GENBANK/CB413227
SI  - GENBANK/CB413228
SI  - GENBANK/CB413229
SI  - GENBANK/CB413230
SI  - GENBANK/CB413231
SI  - GENBANK/CB413232
SI  - GENBANK/CB413233
SI  - GENBANK/CB413234
SI  - GENBANK/CB413235
SI  - GENBANK/CB413236
SI  - GENBANK/CB413237
SI  - GENBANK/CB413238
SI  - GENBANK/CB413239
SI  - GENBANK/CB413240
SI  - GENBANK/CB413241
SI  - GENBANK/CB413242
SI  - GENBANK/CB413243
SI  - GENBANK/CB413244
SI  - GENBANK/CB413245
SI  - GENBANK/CB413246
SI  - GENBANK/CB413247
SI  - GENBANK/CB413248
SI  - GENBANK/CB413249
SI  - GENBANK/CB413250
SI  - GENBANK/CB413251
SI  - GENBANK/CB413252
SI  - GENBANK/CB413253
SI  - GENBANK/CB413254
SI  - GENBANK/CB413255
SI  - GENBANK/CB413256
SI  - GENBANK/CB413257
SI  - GENBANK/CB413258
SI  - GENBANK/CB413259
SI  - GENBANK/CB413260
SI  - GENBANK/CB413261
SI  - GENBANK/CB413262
SI  - GENBANK/CB413263
SI  - GENBANK/CB413264
SI  - GENBANK/CB413265
PT  - Comparative Study
PT  - Journal Article
DEP - 20060316
PL  - United States
TA  - Mar Biotechnol (NY)
JT  - Marine biotechnology (New York, N.Y.)
JID - 100892712
RN  - 0 (DNA, Complementary)
RN  - 0 (Proteins)
RN  - 63231-63-0 (RNA)
SB  - IM
MH  - Animals
MH  - Cluster Analysis
MH  - DNA, Complementary/chemistry
MH  - *Expressed Sequence Tags
MH  - Gene Expression/*physiology
MH  - Gene Expression Profiling/veterinary
MH  - Gene Library
MH  - Immune System/physiology
MH  - Molecular Sequence Data
MH  - Pectinidae/genetics/*physiology
MH  - Proteins/*classification/genetics/*physiology
MH  - RNA/chemistry/isolation & purification
EDAT- 2006/04/21 09:00
MHDA- 2007/10/27 09:00
CRDT- 2006/04/21 09:00
PHST- 2005/09/02 00:00 [received]
PHST- 2005/10/03 00:00 [accepted]
PHST- 2006/04/21 09:00 [pubmed]
PHST- 2007/10/27 09:00 [medline]
PHST- 2006/04/21 09:00 [entrez]
AID - 10.1007/s10126-005-0126-4 [doi]
PST - ppublish
SO  - Mar Biotechnol (NY). 2006 Mar-Apr;8(2):161-9. doi: 10.1007/s10126-005-0126-4. 
      Epub 2006 Mar 16.