PMID- 16679564 OWN - NLM STAT- MEDLINE DCOM- 20060713 LR - 20211020 IS - 1085-9195 (Print) IS - 1559-0283 (Electronic) IS - 1085-9195 (Linking) VI - 45 IP - 1 DP - 2006 TI - Single-step multicolor fluorescence in situ hybridization using semiconductor quantum dot-DNA conjugates. PG - 59-70 AB - We report a rapid method for the direct multicolor imaging of multiple subnuclear genetic sequences using novel quantum dot-based fluorescence in situ hybridization (FISH) probes (QD-FISH). Short DNA oligonucleotides were attached on QDs and used in a single hybridization/detection step of target sites in situ. QD-FISH probes penetrate both intact interphase nuclei and metaphase chromosomes and showed good targeting of dense chromatin domains with minimal steric hindrances. We further demonstrated that QD's broad absorption spectra allowed different colored probes specific for distinct subnuclear genetic sequences to be simultaneously excited with a single excitation wavelength and imaged free of chromatic aberrations in a single exposure. Thus, these results demonstrate that QD-FISH probes are very effective in multicolor FISH applications. This work also documents new possibilities of using QD-FISH probes detection down to the single molecule level. FAU - Bentolila, Laurent A AU - Bentolila LA AD - Department of Chemistry and Biochemistry, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA 90095-1569, USA. lbento@chem.ucla.edu FAU - Weiss, Shimon AU - Weiss S LA - eng GR - R01 EB000312/EB/NIBIB NIH HHS/United States GR - R01 EB000312-04/EB/NIBIB NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PL - United States TA - Cell Biochem Biophys JT - Cell biochemistry and biophysics JID - 9701934 RN - 0 (Heterochromatin) RN - 0 (Oligonucleotides) RN - 9007-49-2 (DNA) SB - IM MH - Animals MH - Biotinylation MH - Cell Culture Techniques MH - Cell Line MH - Centromere/chemistry MH - Color MH - DNA/*chemistry MH - HeLa Cells MH - Heterochromatin/chemistry MH - Humans MH - In Situ Hybridization, Fluorescence/*methods MH - Mast Cells/cytology/*metabolism MH - Mice MH - Microscopy, Confocal MH - Models, Chemical MH - Nucleic Acid Hybridization MH - Oligonucleotides/chemical synthesis/chemistry MH - Protein Structure, Tertiary MH - *Quantum Dots PMC - PMC3084375 MID - NIHMS285483 EDAT- 2006/05/09 09:00 MHDA- 2006/07/14 09:00 PMCR- 2011/04/29 CRDT- 2006/05/09 09:00 PHST- 1999/11/30 00:00 [received] PHST- 1999/11/30 00:00 [revised] PHST- 1999/11/30 00:00 [accepted] PHST- 2006/05/09 09:00 [pubmed] PHST- 2006/07/14 09:00 [medline] PHST- 2006/05/09 09:00 [entrez] PHST- 2011/04/29 00:00 [pmc-release] AID - CBB:45:1:59 [pii] AID - 10.1385/CBB:45:1:59 [doi] PST - ppublish SO - Cell Biochem Biophys. 2006;45(1):59-70. doi: 10.1385/CBB:45:1:59.