PMID- 17041102 OWN - NLM STAT- MEDLINE DCOM- 20070130 LR - 20200930 IS - 1535-7163 (Print) IS - 1535-7163 (Linking) VI - 5 IP - 10 DP - 2006 Oct TI - Correction for chromosome-17 is critical for the determination of true Her-2/neu gene amplification status in breast cancer. PG - 2572-9 AB - PURPOSE: Trastuzumab is the cornerstone for treatment of women with HER2-overexpressing breast cancer, both in the adjuvant and in the metastatic settings. The accurate assessment of HER2 is, therefore, critical to identifying patients who may benefit from trastuzumab-based therapy. This project aimed to determine the optimal scoring method for fluorescence in situ hybridization (FISH) assay. METHODS: FISH assay was done on 893 samples of breast cancer. Three scoring methods were evaluated: Her2/CEP17> or =2, Her2>4, or Her2>6. Protein and gene expression were evaluated by immunohistochemistry (n = 584) and mRNA/assay/nucleic acid sequence-based amplification (NASBA; n = 90). RESULTS: Samples were divided into five groups based on FISH results: disomic amplified and nonamplified, polysomic amplified, nonamplified, and discordant (10.8% of cases, mostly positive with Her2>4 scoring, but negative with the others). Her2/CEP17> or =2 and Her2>6 scoring methods showed the best association (a) with regard to FISH scoring (kappa = 0.906, P < 10(-6)) and (b) between FISH and immunohistochemistry (3+ as positive; kappa > 0.650, P < 10(-6)) or NASBA (kappa > 0.536, P < 10(-6)). Polysomy had an effect on Her2 copy number (P < 10(-6)), but had no effect on protein and mRNA content. Therefore, within the discordant subgroup, for which additive Her-2 gene copies are due to high polysomy, protein and mRNA levels were similar to those of the nonamplified samples. For this subgroup, the best concordance between FISH/immunohistochemistry/NASBA was observed with the Her2/CEP17 ratio and Her-2>6 scoring (68% and 58% perfect matches, respectively). No perfect matches were observed using the Her2>4 scoring method. CONCLUSION: Correction for chromosome-17 is the method of choice for clinical practice; Her-2>6, but not Her-2>4, could be used as an alternative. FAU - Dal Lago, Lissandra AU - Dal Lago L AD - Translational Research Unit, Bordet Institute, Brussels, Belgium. FAU - Durbecq, Virginie AU - Durbecq V FAU - Desmedt, Christine AU - Desmedt C FAU - Salgado, Roberto AU - Salgado R FAU - Verjat, Thibault AU - Verjat T FAU - Lespagnard, Laurence AU - Lespagnard L FAU - Ma, Yan AU - Ma Y FAU - Veys, Isabelle AU - Veys I FAU - Di Leo, Angelo AU - Di Leo A FAU - Sotiriou, Christos AU - Sotiriou C FAU - Piccart, Martine AU - Piccart M FAU - Larsimont, Denis AU - Larsimont D LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Mol Cancer Ther JT - Molecular cancer therapeutics JID - 101132535 RN - 0 (RNA, Messenger) RN - EC 2.7.10.1 (Receptor, ErbB-2) SB - IM MH - Aneuploidy MH - Breast Neoplasms/*genetics/metabolism MH - Chromosomes, Human, Pair 17/*genetics MH - Female MH - Humans MH - In Situ Hybridization, Fluorescence MH - Nucleic Acid Amplification Techniques MH - RNA, Messenger/biosynthesis MH - Receptor, ErbB-2/biosynthesis/*genetics EDAT- 2006/10/17 09:00 MHDA- 2007/01/31 09:00 CRDT- 2006/10/17 09:00 PHST- 2006/10/17 09:00 [pubmed] PHST- 2007/01/31 09:00 [medline] PHST- 2006/10/17 09:00 [entrez] AID - 5/10/2572 [pii] AID - 10.1158/1535-7163.MCT-06-0129 [doi] PST - ppublish SO - Mol Cancer Ther. 2006 Oct;5(10):2572-9. doi: 10.1158/1535-7163.MCT-06-0129.