PMID- 17096419 OWN - NLM STAT- MEDLINE DCOM- 20070306 LR - 20131121 IS - 1097-0134 (Electronic) IS - 0887-3585 (Linking) VI - 66 IP - 2 DP - 2007 Feb 1 TI - NMR structure and binding studies confirm that PA4608 from Pseudomonas aeruginosa is a PilZ domain and a c-di-GMP binding protein. PG - 266-71 AB - PA4608 is a 125 residue protein from Pseudomonas aeruginosa with a recent identification as a PilZ domain and putative bis-(3'-5')-cyclic dimeric guanosine monophosphate (c-di-GMP) adaptor protein that plays a role in bacterial second-messenger regulated processes. The nuclear magnetic resonance (NMR) structure of PA4608 has been determined and c-di-GMP binding has been confirmed by NMR titration studies. The monomeric core structure of PA4608 contains a six-stranded anti-parallel beta barrel flanked by three helices. Conserved surface residues among PA4608 homologs suggest the c-di-GMP binding site is at one end of the barrel and includes residues in the helices as well as in the unstructured N-terminus. Chemical shift changes in PA4608 resonances upon titration with c-di-GMP confirm binding. This evidence supports the hypothesis that proteins containing PilZ domains are the long-sought c-di-GMP adaptor proteins. CI - Copyright 2006 Wiley-Liss, Inc. FAU - Ramelot, Theresa A AU - Ramelot TA AD - Pacific Northwest National Laboratory, Biological Sciences Division, Richland, Washington 99354, USA. FAU - Yee, Adelinda AU - Yee A FAU - Cort, John R AU - Cort JR FAU - Semesi, Anthony AU - Semesi A FAU - Arrowsmith, Cheryl H AU - Arrowsmith CH FAU - Kennedy, Michael A AU - Kennedy MA LA - eng GR - P50-GM62413/GM/NIGMS NIH HHS/United States PT - Comparative Study PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, U.S. Gov't, Non-P.H.S. PL - United States TA - Proteins JT - Proteins JID - 8700181 RN - 0 (Adaptor Proteins, Signal Transducing) RN - 0 (Bacterial Proteins) RN - 61093-23-0 (bis(3',5')-cyclic diguanylic acid) RN - H2D2X058MU (Cyclic GMP) SB - IM MH - Adaptor Proteins, Signal Transducing/*chemistry/metabolism MH - Amino Acid Sequence MH - Bacterial Proteins/*chemistry/metabolism MH - Binding Sites MH - Cyclic GMP/*analogs & derivatives/metabolism MH - Models, Molecular MH - Molecular Sequence Data MH - Nuclear Magnetic Resonance, Biomolecular MH - Protein Binding MH - Protein Conformation MH - Protein Structure, Tertiary MH - Pseudomonas aeruginosa/*chemistry MH - Sequence Alignment MH - Sequence Homology, Amino Acid MH - Vibrio cholerae/chemistry EDAT- 2006/11/11 09:00 MHDA- 2007/03/07 09:00 CRDT- 2006/11/11 09:00 PHST- 2006/11/11 09:00 [pubmed] PHST- 2007/03/07 09:00 [medline] PHST- 2006/11/11 09:00 [entrez] AID - 10.1002/prot.21199 [doi] PST - ppublish SO - Proteins. 2007 Feb 1;66(2):266-71. doi: 10.1002/prot.21199.