PMID- 17130301 OWN - NLM STAT- MEDLINE DCOM- 20070220 LR - 20181113 IS - 0022-538X (Print) IS - 1098-5514 (Electronic) IS - 0022-538X (Linking) VI - 80 IP - 24 DP - 2006 Dec TI - Screening random peptide libraries with subacute sclerosing panencephalitis brain-derived recombinant antibodies identifies multiple epitopes in the C-terminal region of the measles virus nucleocapsid protein. PG - 12121-30 AB - Infectious and inflammatory diseases of the CNS are often characterized by a robust B-cell response that manifests as increased intrathecal immunoglobulin G (IgG) synthesis and the presence of oligoclonal bands. We previously used laser capture microdissection and single-cell PCR to analyze the IgG variable regions of plasma cells from the brain of a patient with subacute sclerosing panencephalitis (SSPE). Five of eight human IgG1 recombinant antibodies (rAbs) derived from SSPE brain plasma cell clones recognized the measles virus (MV) nucleocapsid protein, confirming that the antibody response in SSPE targets primarily the agent causing disease. In this study, as part of our work on antigen identification, we used four rAbs to probe a random phage-displayed peptide library to determine if epitopes within the MV nucleocapsid protein could be identified with SSPE brain rAbs. All four of the SSPE rAbs enriched phage-displayed peptide sequences that reacted specifically to their panning rAb by enzyme-linked immunosorbent assay. BLASTP searches of the NCBI protein database revealed clear homologies in three peptides and different amino acid stretches within the 65 C-terminal amino acids of the MV nucleocapsid protein. The specificities of SSPE rAbs to these regions of the MV nucleocapsid protein were confirmed by binding to synthetic peptides or to short cDNA expression products. These results indicate the feasibility of using peptide screening for antigen discovery in central nervous system inflammatory diseases of unknown etiology, such as multiple sclerosis, neurosarcoidosis, or Behcet's syndrome. FAU - Owens, Gregory P AU - Owens GP AD - Department of Neurology, University of Colorado Health Sciences Center, 4200 E. 9th Avenue, Mail Stop B182, Denver, CO 80262, USA. FAU - Shearer, Andrew J AU - Shearer AJ FAU - Yu, Xiaoli AU - Yu X FAU - Ritchie, Alanna M AU - Ritchie AM FAU - Keays, Kathryne M AU - Keays KM FAU - Bennett, Jeffrey L AU - Bennett JL FAU - Gilden, Donald H AU - Gilden DH FAU - Burgoon, Mark P AU - Burgoon MP LA - eng GR - P01 NS032623/NS/NINDS NIH HHS/United States GR - R01 NS041549/NS/NINDS NIH HHS/United States GR - NS 32623/NS/NINDS NIH HHS/United States GR - NS 41549/NS/NINDS NIH HHS/United States PT - Comparative Study PT - Journal Article PT - Research Support, N.I.H., Extramural PL - United States TA - J Virol JT - Journal of virology JID - 0113724 RN - 0 (Antibodies, Viral) RN - 0 (Epitopes) RN - 0 (Nucleocapsid Proteins) RN - 0 (Peptide Library) RN - 0 (Peptides) SB - IM MH - Amino Acid Sequence MH - Antibodies, Viral/*genetics MH - Computational Biology MH - Enzyme-Linked Immunosorbent Assay MH - Epitopes/*genetics MH - Humans MH - Measles virus/*genetics MH - Molecular Sequence Data MH - Nucleocapsid Proteins/*genetics MH - Peptide Library MH - Peptides/*genetics MH - Sequence Alignment MH - Sequence Analysis, DNA MH - Subacute Sclerosing Panencephalitis/*immunology PMC - PMC1676253 EDAT- 2006/11/30 09:00 MHDA- 2007/02/21 09:00 PMCR- 2007/04/01 CRDT- 2006/11/30 09:00 PHST- 2006/11/30 09:00 [pubmed] PHST- 2007/02/21 09:00 [medline] PHST- 2006/11/30 09:00 [entrez] PHST- 2007/04/01 00:00 [pmc-release] AID - 80/24/12121 [pii] AID - 1704-06 [pii] AID - 10.1128/JVI.01704-06 [doi] PST - ppublish SO - J Virol. 2006 Dec;80(24):12121-30. doi: 10.1128/JVI.01704-06.