PMID- 17293537 OWN - NLM STAT- MEDLINE DCOM- 20070607 LR - 20181113 IS - 1468-6244 (Electronic) IS - 0022-2593 (Print) IS - 0022-2593 (Linking) VI - 44 IP - 2 DP - 2007 Feb TI - Genetic variants in brain-derived neurotrophic factor associated with Alzheimer's disease. PG - e66 AB - BACKGROUND: Alzheimer's disease is complex, with variants in multiple genes contributing to interactions increasing risk for the disease. Brain-derived neurotrophic factor (BDNF) promotes neuronal survival and modulates hippocampal-dependent memory. METHODS: We examined 11 SNPs that spanned the gene on chromosome 11p14 in 220 Alzheimer's patients and 128 control spouses. RESULTS: Not all of the SNPs were informative, due to minor allele frequencies of <2%. Neither C270T nor two SNPs that reside proximal to exon V had significant association with the disease. However, we did find that the heterozygous form of the rs6265 SNP (Val66Met), as well as the diplotype of three SNPs (rs6265, rs11030104, rs2049045; H1-GTC/H2-ACG) all were highly significant in APOE 4 non-carriers (OR = 2.734; p = 0.0096). CONCLUSION: The combination of the diplotypes for three SNPs exhibited significant p values for Alzheimer's APOE 4 non-carriers. The two SNPs (rs11030104 and rs2049045) are found between exons VI and VII, while the Val66Met polymorphism is located in the coding exon VIII; the total distance for the three SNPs is 14308 bp. Whether the SNPs are involved with alternative splicing of the VII/VIII transcript is of considerable interest. FAU - Huang, R AU - Huang R AD - Institute of Molecular Medicine and Genetics, Augusta, Georgia, USA. FAU - Huang, J AU - Huang J FAU - Cathcart, H AU - Cathcart H FAU - Smith, S AU - Smith S FAU - Poduslo, S E AU - Poduslo SE LA - eng GR - U24 AG021886/AG/NIA NIH HHS/United States GR - U24AG21886/AG/NIA NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PL - England TA - J Med Genet JT - Journal of medical genetics JID - 2985087R RN - 0 (Brain-Derived Neurotrophic Factor) SB - IM MH - Aged MH - Aged, 80 and over MH - Alzheimer Disease/epidemiology/*genetics/pathology MH - Brain-Derived Neurotrophic Factor/*genetics MH - Cerebral Cortex/pathology MH - Chromosome Mapping MH - *Chromosomes, Human, Pair 11 MH - Female MH - *Genetic Variation MH - Genotype MH - Humans MH - Male MH - Middle Aged MH - Odds Ratio MH - Polymorphism, Single Nucleotide MH - Reference Values MH - Risk Assessment PMC - PMC2598055 COIS- Competing interests: None declared. EDAT- 2007/02/13 09:00 MHDA- 2007/06/08 09:00 PMCR- 2010/02/01 CRDT- 2007/02/13 09:00 PHST- 2007/02/13 09:00 [pubmed] PHST- 2007/06/08 09:00 [medline] PHST- 2007/02/13 09:00 [entrez] PHST- 2010/02/01 00:00 [pmc-release] AID - 44/2/e66 [pii] AID - mg44883 [pii] AID - 10.1136/jmg.2006.044883 [doi] PST - ppublish SO - J Med Genet. 2007 Feb;44(2):e66. doi: 10.1136/jmg.2006.044883.