PMID- 17401460 OWN - NLM STAT- MEDLINE DCOM- 20070417 LR - 20220316 IS - 1476-5586 (Electronic) IS - 1522-8002 (Print) IS - 1476-5586 (Linking) VI - 9 IP - 3 DP - 2007 Mar TI - Molecular characterization of TMPRSS2-ERG gene fusion in the NCI-H660 prostate cancer cell line: a new perspective for an old model. PG - 200-6 AB - Recent studies have established that a significant fraction of prostate cancers harbor a signature gene fusion between the 5' region of androgen-regulated TMPRSS2 and an ETS family transcription factor, most commonly ERG. Studies on the molecular mechanisms and functional consequences of this important chromosomal rearrangement are currently limited to the VCaP cell line derived from a vertebral bone metastasis of a hormone-refractory prostate tumor. Here we report on the NCI-H660 cell line, derived from a metastatic site of an extrapulmonary small cell carcinoma arising from the prostate. NCI-H660 harbors TMPRSS2-ERG fusion with a homozygous intronic deletion between TMPRSS2 and ERG. We demonstrate this by real-time quantitative polymerase chain reaction, a two-stage dual-color interphase fluorescence in situ hybridization (FISH) assay testing for TMPRSS2 and ERG break-aparts, and single-nucleotide polymorphism oligonucleotide arrays. The deletion is consistent with the common intronic deletion found on chromosome 21q22.2-3 in human prostate cancer samples. We demonstrate the physical juxtaposition of TMPRSS2 and ERG on the DNA level by fiber FISH. The androgen receptor-negative NCI-H660 cell line expresses ERG in an androgen-independent fashion. This in vitro model system has the potential to provide important pathobiologic insights into TMPRSS2-ERG fusion prostate cancer. FAU - Mertz, Kirsten D AU - Mertz KD AD - Department of Pathology, Brigham and Women's Hospital, Boston, MA 02115-6110, USA. FAU - Setlur, Sunita R AU - Setlur SR FAU - Dhanasekaran, Saravana M AU - Dhanasekaran SM FAU - Demichelis, Francesca AU - Demichelis F FAU - Perner, Sven AU - Perner S FAU - Tomlins, Scott AU - Tomlins S FAU - Tchinda, Joelle AU - Tchinda J FAU - Laxman, Bharathi AU - Laxman B FAU - Vessella, Robert L AU - Vessella RL FAU - Beroukhim, Rameen AU - Beroukhim R FAU - Lee, Charles AU - Lee C FAU - Chinnaiyan, Arul M AU - Chinnaiyan AM FAU - Rubin, Mark A AU - Rubin MA LA - eng GR - NCI P50 CA69568/CA/NCI NIH HHS/United States GR - R01AG21404/AG/NIA NIH HHS/United States GR - P50 CA090381/CA/NCI NIH HHS/United States GR - NCI P50 CA090381/CA/NCI NIH HHS/United States GR - R01 AG021404/AG/NIA NIH HHS/United States GR - P50 CA069568/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't PT - Research Support, U.S. Gov't, Non-P.H.S. PL - United States TA - Neoplasia JT - Neoplasia (New York, N.Y.) JID - 100886622 RN - 0 (DNA-Binding Proteins) RN - 0 (ERG protein, human) RN - 0 (Trans-Activators) RN - 0 (Transcriptional Regulator ERG) RN - EC 3.4.21.- (Serine Endopeptidases) RN - EC 3.4.21.- (TMPRSS2 protein, human) SB - IM MH - Cell Line, Tumor MH - DNA-Binding Proteins/*genetics MH - *Gene Fusion MH - Gene Rearrangement MH - Humans MH - In Situ Hybridization, Fluorescence MH - Male MH - Middle Aged MH - Polymorphism, Single Nucleotide MH - Prostatic Neoplasms/*genetics MH - Serine Endopeptidases/*genetics MH - Trans-Activators/*genetics MH - Transcriptional Regulator ERG PMC - PMC1838578 EDAT- 2007/04/03 09:00 MHDA- 2007/04/18 09:00 PMCR- 2007/03/01 CRDT- 2007/04/03 09:00 PHST- 2007/01/04 00:00 [received] PHST- 2007/01/23 00:00 [revised] PHST- 2007/01/24 00:00 [accepted] PHST- 2007/04/03 09:00 [pubmed] PHST- 2007/04/18 09:00 [medline] PHST- 2007/04/03 09:00 [entrez] PHST- 2007/03/01 00:00 [pmc-release] AID - 07103 [pii] AID - 10.1593/neo.07103 [doi] PST - ppublish SO - Neoplasia. 2007 Mar;9(3):200-6. doi: 10.1593/neo.07103.