PMID- 17586663
OWN - NLM
STAT- MEDLINE
DCOM- 20071023
LR  - 20240109
IS  - 0099-2240 (Print)
IS  - 1098-5336 (Electronic)
IS  - 0099-2240 (Linking)
VI  - 73
IP  - 17
DP  - 2007 Sep
TI  - Distribution and diversity of archaeal ammonia monooxygenase genes associated 
      with corals.
PG  - 5642-7
AB  - Corals are known to harbor diverse microbial communities of Bacteria and Archaea, 
      yet the ecological role of these microorganisms remains largely unknown. Here we 
      report putative ammonia monooxygenase subunit A (amoA) genes of archaeal origin 
      associated with corals. Multiple DNA samples drawn from nine coral species and 
      four different reef locations were PCR screened for archaeal and bacterial amoA 
      genes, and archaeal amoA gene sequences were obtained from five different species 
      of coral collected in Bocas del Toro, Panama. The 210 coral-associated archaeal 
      amoA sequences recovered in this study were broadly distributed phylogenetically, 
      with most only distantly related to previously reported sequences from 
      coastal/estuarine sediments and oceanic water columns. In contrast, the bacterial 
      amoA gene could not be amplified from any of these samples. These results offer 
      further evidence for the widespread presence of the archaeal amoA gene in marine 
      ecosystems, including coral reefs.
FAU - Beman, J Michael
AU  - Beman JM
AD  - Department of Geological and Environmental Sciences, Building 320 - Room 118, 
      Stanford University, Stanford, CA 94305-2115, USA.
FAU - Roberts, Kathryn J
AU  - Roberts KJ
FAU - Wegley, Linda
AU  - Wegley L
FAU - Rohwer, Forest
AU  - Rohwer F
FAU - Francis, Christopher A
AU  - Francis CA
LA  - eng
SI  - GENBANK/EF382414
SI  - GENBANK/EF382415
SI  - GENBANK/EF382416
SI  - GENBANK/EF382417
SI  - GENBANK/EF382418
SI  - GENBANK/EF382419
SI  - GENBANK/EF382420
SI  - GENBANK/EF382421
SI  - GENBANK/EF382422
SI  - GENBANK/EF382423
SI  - GENBANK/EF382424
SI  - GENBANK/EF382425
SI  - GENBANK/EF382426
SI  - GENBANK/EF382427
SI  - GENBANK/EF382428
SI  - GENBANK/EF382429
SI  - GENBANK/EF382430
SI  - GENBANK/EF382431
SI  - GENBANK/EF382432
SI  - GENBANK/EF382433
SI  - GENBANK/EF382434
SI  - GENBANK/EF382435
SI  - GENBANK/EF382436
SI  - GENBANK/EF382437
SI  - GENBANK/EF382438
SI  - GENBANK/EF382439
SI  - GENBANK/EF382440
SI  - GENBANK/EF382441
SI  - GENBANK/EF382442
SI  - GENBANK/EF382443
SI  - GENBANK/EF382444
SI  - GENBANK/EF382445
SI  - GENBANK/EF382446
SI  - GENBANK/EF382447
SI  - GENBANK/EF382448
SI  - GENBANK/EF382449
SI  - GENBANK/EF382450
SI  - GENBANK/EF382451
SI  - GENBANK/EF382452
SI  - GENBANK/EF382453
SI  - GENBANK/EF382454
SI  - GENBANK/EF382455
SI  - GENBANK/EF382456
SI  - GENBANK/EF382457
SI  - GENBANK/EF382458
SI  - GENBANK/EF382459
SI  - GENBANK/EF382460
SI  - GENBANK/EF382461
SI  - GENBANK/EF382462
SI  - GENBANK/EF382463
SI  - GENBANK/EF382464
SI  - GENBANK/EF382465
SI  - GENBANK/EF382466
SI  - GENBANK/EF382467
SI  - GENBANK/EF382468
SI  - GENBANK/EF382469
SI  - GENBANK/EF382470
SI  - GENBANK/EF382471
SI  - GENBANK/EF382472
SI  - GENBANK/EF382473
SI  - GENBANK/EF382474
SI  - GENBANK/EF382475
SI  - GENBANK/EF382476
SI  - GENBANK/EF382477
SI  - GENBANK/EF382478
SI  - GENBANK/EF382479
SI  - GENBANK/EF382480
SI  - GENBANK/EF382481
SI  - GENBANK/EF382482
SI  - GENBANK/EF382483
SI  - GENBANK/EF382484
SI  - GENBANK/EF382485
SI  - GENBANK/EF382486
SI  - GENBANK/EF382487
SI  - GENBANK/EF382488
SI  - GENBANK/EF382489
SI  - GENBANK/EF382490
SI  - GENBANK/EF382491
SI  - GENBANK/EF382492
SI  - GENBANK/EF382493
SI  - GENBANK/EF382494
SI  - GENBANK/EF382495
SI  - GENBANK/EF382496
SI  - GENBANK/EF382497
SI  - GENBANK/EF382498
SI  - GENBANK/EF382499
SI  - GENBANK/EF382500
SI  - GENBANK/EF382501
SI  - GENBANK/EF382502
SI  - GENBANK/EF382503
SI  - GENBANK/EF382504
SI  - GENBANK/EF382505
SI  - GENBANK/EF382506
SI  - GENBANK/EF382507
SI  - GENBANK/EF382508
SI  - GENBANK/EF382509
SI  - GENBANK/EF382510
SI  - GENBANK/EF382511
SI  - GENBANK/EF382512
SI  - GENBANK/EF382513
SI  - GENBANK/EF382514
SI  - GENBANK/EF382515
SI  - GENBANK/EF382516
SI  - GENBANK/EF382517
SI  - GENBANK/EF382518
SI  - GENBANK/EF382519
SI  - GENBANK/EF382520
SI  - GENBANK/EF382521
SI  - GENBANK/EF382522
SI  - GENBANK/EF382523
SI  - GENBANK/EF382524
SI  - GENBANK/EF382525
SI  - GENBANK/EF382526
SI  - GENBANK/EF382527
SI  - GENBANK/EF382528
SI  - GENBANK/EF382529
SI  - GENBANK/EF382530
SI  - GENBANK/EF382531
SI  - GENBANK/EF382532
SI  - GENBANK/EF382533
SI  - GENBANK/EF382534
SI  - GENBANK/EF382535
SI  - GENBANK/EF382536
SI  - GENBANK/EF382537
SI  - GENBANK/EF382538
SI  - GENBANK/EF382539
SI  - GENBANK/EF382540
SI  - GENBANK/EF382541
SI  - GENBANK/EF382542
SI  - GENBANK/EF382543
SI  - GENBANK/EF382544
SI  - GENBANK/EF382545
SI  - GENBANK/EF382546
SI  - GENBANK/EF382547
SI  - GENBANK/EF382548
SI  - GENBANK/EF382549
SI  - GENBANK/EF382550
SI  - GENBANK/EF382551
SI  - GENBANK/EF382552
SI  - GENBANK/EF382553
SI  - GENBANK/EF382554
SI  - GENBANK/EF382555
SI  - GENBANK/EF382556
SI  - GENBANK/EF382557
SI  - GENBANK/EF382558
SI  - GENBANK/EF382559
SI  - GENBANK/EF382560
SI  - GENBANK/EF382561
SI  - GENBANK/EF382562
SI  - GENBANK/EF382563
SI  - GENBANK/EF382564
SI  - GENBANK/EF382565
SI  - GENBANK/EF382566
SI  - GENBANK/EF382567
SI  - GENBANK/EF382568
SI  - GENBANK/EF382569
SI  - GENBANK/EF382570
SI  - GENBANK/EF382571
SI  - GENBANK/EF382572
SI  - GENBANK/EF382573
SI  - GENBANK/EF382574
SI  - GENBANK/EF382575
SI  - GENBANK/EF382576
SI  - GENBANK/EF382577
SI  - GENBANK/EF382578
SI  - GENBANK/EF382579
SI  - GENBANK/EF382580
SI  - GENBANK/EF382581
SI  - GENBANK/EF382582
SI  - GENBANK/EF382583
SI  - GENBANK/EF382584
SI  - GENBANK/EF382585
SI  - GENBANK/EF382586
SI  - GENBANK/EF382587
SI  - GENBANK/EF382588
SI  - GENBANK/EF382589
SI  - GENBANK/EF382590
SI  - GENBANK/EF382591
SI  - GENBANK/EF382592
SI  - GENBANK/EF382593
SI  - GENBANK/EF382594
SI  - GENBANK/EF382595
SI  - GENBANK/EF382596
SI  - GENBANK/EF382597
SI  - GENBANK/EF382598
SI  - GENBANK/EF382599
SI  - GENBANK/EF382600
SI  - GENBANK/EF382601
SI  - GENBANK/EF382602
SI  - GENBANK/EF382603
SI  - GENBANK/EF382604
SI  - GENBANK/EF382605
SI  - GENBANK/EF382606
SI  - GENBANK/EF382607
SI  - GENBANK/EF382608
SI  - GENBANK/EF382609
SI  - GENBANK/EF382610
SI  - GENBANK/EF382611
SI  - GENBANK/EF382612
SI  - GENBANK/EF382613
SI  - GENBANK/EF382614
SI  - GENBANK/EF382615
SI  - GENBANK/EF382616
SI  - GENBANK/EF382617
SI  - GENBANK/EF382618
SI  - GENBANK/EF382619
SI  - GENBANK/EF382620
SI  - GENBANK/EF382621
SI  - GENBANK/EF382622
SI  - GENBANK/EF382623
PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
PT  - Research Support, U.S. Gov't, Non-P.H.S.
DEP - 20070622
PL  - United States
TA  - Appl Environ Microbiol
JT  - Applied and environmental microbiology
JID - 7605801
RN  - 0 (Archaeal Proteins)
RN  - 0 (DNA, Archaeal)
RN  - EC 1.- (Oxidoreductases)
RN  - EC 1.7.3.- (ammonia monooxygenase)
SB  - IM
MH  - Animals
MH  - Anthozoa/*microbiology
MH  - Archaea/*enzymology
MH  - Archaeal Proteins/genetics/metabolism
MH  - DNA, Archaeal/analysis
MH  - *Genetic Variation
MH  - Molecular Sequence Data
MH  - Oxidoreductases/classification/*genetics
MH  - Phylogeny
MH  - Sequence Analysis, DNA
PMC - PMC2042080
EDAT- 2007/06/26 09:00
MHDA- 2007/10/24 09:00
PMCR- 2008/01/01
CRDT- 2007/06/26 09:00
PHST- 2007/06/26 09:00 [pubmed]
PHST- 2007/10/24 09:00 [medline]
PHST- 2007/06/26 09:00 [entrez]
PHST- 2008/01/01 00:00 [pmc-release]
AID - AEM.00461-07 [pii]
AID - 0461-07 [pii]
AID - 10.1128/AEM.00461-07 [doi]
PST - ppublish
SO  - Appl Environ Microbiol. 2007 Sep;73(17):5642-7. doi: 10.1128/AEM.00461-07. Epub 
      2007 Jun 22.