PMID- 18941901 OWN - NLM STAT- MEDLINE DCOM- 20090204 LR - 20230425 IS - 1559-7113 (Electronic) IS - 1559-7105 (Print) IS - 1559-7105 (Linking) VI - 36 IP - 1-4 DP - 2008 Aug TI - Reporting neural activity with genetically encoded calcium indicators. PG - 69-86 LID - 10.1007/s11068-008-9029-4 [doi] AB - Genetically encoded calcium indicators (GECIs), based on recombinant fluorescent proteins, have been engineered to observe calcium transients in living cells and organisms. Through observation of calcium, these indicators also report neural activity. We review progress in GECI construction and application, particularly toward in vivo monitoring of sparse action potentials (APs). We summarize the extrinsic and intrinsic factors that influence GECI performance. A simple model of GECI response to AP firing demonstrates the relative significance of these factors. We recommend a standardized protocol for evaluating GECIs in a physiologically relevant context. A potential method of simultaneous optical control and recording of neuronal circuits is presented. FAU - Hires, S Andrew AU - Hires SA AD - Howard Hughes Medical Institute, Janelia Farm Research Campus, 19700 Helix Dr, Ashburn, VA 20147, USA. hiresa@janelia.hhmi.org FAU - Tian, Lin AU - Tian L FAU - Looger, Loren L AU - Looger LL LA - eng GR - HHMI/Howard Hughes Medical Institute/United States PT - Journal Article PT - Research Support, Non-U.S. Gov't PT - Review DEP - 20081022 PL - United States TA - Brain Cell Biol JT - Brain cell biology JID - 101272887 RN - 0 (Luminescent Proteins) SB - IM MH - Action Potentials/*physiology MH - Animals MH - Calcium Signaling/*physiology MH - Electrophysiology/methods MH - Luminescent Proteins/genetics/*metabolism MH - Microscopy, Confocal/methods MH - Neurons/metabolism/*physiology MH - Signal Transduction/*physiology PMC - PMC2755531 MID - NIHMS143611 OID - NLM: HHMIMS143611 EDAT- 2008/10/23 09:00 MHDA- 2009/02/05 09:00 PMCR- 2009/10/02 CRDT- 2008/10/23 09:00 PHST- 2008/05/06 00:00 [received] PHST- 2008/08/06 00:00 [accepted] PHST- 2008/06/22 00:00 [revised] PHST- 2008/10/23 09:00 [pubmed] PHST- 2009/02/05 09:00 [medline] PHST- 2008/10/23 09:00 [entrez] PHST- 2009/10/02 00:00 [pmc-release] AID - 10.1007/s11068-008-9029-4 [doi] PST - ppublish SO - Brain Cell Biol. 2008 Aug;36(1-4):69-86. doi: 10.1007/s11068-008-9029-4. Epub 2008 Oct 22.