PMID- 19363441 OWN - NLM STAT- MEDLINE DCOM- 20100202 LR - 20220310 IS - 1532-0979 (Electronic) IS - 0147-5185 (Print) IS - 0147-5185 (Linking) VI - 33 IP - 7 DP - 2009 Jul TI - Diagnosis of NUT midline carcinoma using a NUT-specific monoclonal antibody. PG - 984-91 LID - 10.1097/PAS.0b013e318198d666 [doi] AB - NUT midline carcinoma (NMC) is a uniformly lethal malignancy that is defined by rearrangement of the nuclear protein in testis (NUT) gene on chromosome 15q14. NMCs are morphologically indistinguishable from other poorly differentiated carcinomas, and the diagnosis is usually made currently by fluorescence in situ hybridization (FISH). As normal NUT expression is confined to testis and ovary, we reasoned that an immunohistochemical (IHC) stain for NUT would be useful in diagnosing NMC. To this end, we raised a highly specific rabbit monoclonal antibody, C52, against a recombinant NUT polypeptide, and developed an IHC staining protocol. The sensitivity and specificity of C52 staining was evaluated in a panel of 1068 tissues, predominantly diverse types of carcinomas (n=906), including 30 NMCs. Split-apart FISH for NUT rearrangement was used as a "gold standard" diagnostic test for NMC. C52 immunoreactivity among carcinomas was confined to NMCs. IHC staining had a sensitivity of 87%, a specificity of 100%, a negative predictive value of 99%, and a positive predictive value of 100%. Two new cases of NMC containing BRD4-NUT fusions were detected by C52 IHC, but missed by conventional FISH. In both instances, these tumors contained cryptic BRD4-NUT rearrangements, as confirmed by FISH using a refined set of probes. Some germ cell tumors, including 64% of dysgerminomas, showed weak NUT immunoreactivity, consistent with the expression of NUT in normal germ cells. We conclude that IHC staining with the C52 monoclonal antibody is a highly sensitive and specific test that reliably distinguishes NMC from other forms of carcinoma. The NUT antibody is being prepared for commercial release and will be available in the near future. FAU - Haack, Herbert AU - Haack H AD - Cell Signaling Technology Inc., Danvers, MA, USA. FAU - Johnson, Laura A AU - Johnson LA FAU - Fry, Christopher J AU - Fry CJ FAU - Crosby, Katherine AU - Crosby K FAU - Polakiewicz, Roberto D AU - Polakiewicz RD FAU - Stelow, Edward B AU - Stelow EB FAU - Hong, Seung-Mo AU - Hong SM FAU - Schwartz, Brian E AU - Schwartz BE FAU - Cameron, Michael J AU - Cameron MJ FAU - Rubin, Mark A AU - Rubin MA FAU - Chang, Martin C AU - Chang MC FAU - Aster, Jon C AU - Aster JC FAU - French, Christopher A AU - French CA LA - eng GR - R01 CA124633/CA/NCI NIH HHS/United States GR - R01 CA124633-02/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PL - United States TA - Am J Surg Pathol JT - The American journal of surgical pathology JID - 7707904 RN - 0 (Antibodies, Monoclonal) RN - 0 (BRD4-NUT fusion oncogene protein, human) RN - 0 (NUTM1 protein, human) RN - 0 (Neoplasm Proteins) RN - 0 (Nuclear Proteins) RN - 0 (Oncogene Proteins) RN - 0 (Oncogene Proteins, Fusion) SB - IM MH - Animals MH - *Antibodies, Monoclonal MH - Antibody Specificity MH - Carcinoma/*diagnosis/genetics MH - Humans MH - Immunohistochemistry MH - In Situ Hybridization, Fluorescence MH - Neoplasm Proteins MH - Nuclear Proteins/genetics/immunology MH - Oncogene Proteins/genetics/immunology MH - Oncogene Proteins, Fusion MH - Rabbits MH - Reverse Transcriptase Polymerase Chain Reaction MH - Sensitivity and Specificity PMC - PMC2783402 MID - NIHMS87267 EDAT- 2009/04/14 09:00 MHDA- 2010/02/03 06:00 PMCR- 2010/07/01 CRDT- 2009/04/14 09:00 PHST- 2009/04/14 09:00 [entrez] PHST- 2009/04/14 09:00 [pubmed] PHST- 2010/02/03 06:00 [medline] PHST- 2010/07/01 00:00 [pmc-release] AID - 10.1097/PAS.0b013e318198d666 [doi] PST - ppublish SO - Am J Surg Pathol. 2009 Jul;33(7):984-91. doi: 10.1097/PAS.0b013e318198d666.