PMID- 19462231 OWN - NLM STAT- MEDLINE DCOM- 20091125 LR - 20211020 IS - 1573-6903 (Electronic) IS - 0364-3190 (Linking) VI - 34 IP - 11 DP - 2009 Nov TI - An improved method to obtain a soluble nuclear fraction from embryonic brain tissue. PG - 2022-9 LID - 10.1007/s11064-009-9993-9 [doi] AB - This paper describes modifications of the standard methods for obtaining a soluble nuclear fraction from embryonic brain tissue. The main improvements are: (1) the inclusion of a low speed centrifugation step to prevent the appearance of high density contaminants, (2) a sucrose density gradient to remove perinuclear mitochondria and ER membranes and (3) a protein extraction approach which significantly enhances protein yield. To demonstrate the effectiveness of the method, pellets were analyzed by light and electron microscopy and purity of the soluble extracts was immunologically tested. Finally, to illustrate the applicability of this approach, the induction of the transcription factor HIF-1 (hypoxia-inducible factor-1) was assessed by Western blot using soluble nuclear fractions and by immuno-electron microscopy using purified nuclear fractions, both obtained from the optic lobes of chick embryos. In conclusion, the procedure presently described appears to be reliable and convenient for obtaining a pure soluble nuclear fraction from a discrete amount of embryonic brain tissue. FAU - Giusti, Sebastian AU - Giusti S AD - Institute of Cell Biology and Neuroscience "Prof. E De Robertis", University of Buenos Aires, Paraguay, Argentina. FAU - Bogetti, Maria Eugenia AU - Bogetti ME FAU - Bonafina, Antonela AU - Bonafina A FAU - Fiszer de Plazas, Sara AU - Fiszer de Plazas S LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20090522 PL - United States TA - Neurochem Res JT - Neurochemical research JID - 7613461 RN - 0 (Hypoxia-Inducible Factor 1) RN - 0 (Nuclear Proteins) RN - 0 (Surface-Active Agents) RN - 368GB5141J (Sodium Dodecyl Sulfate) RN - 9002-93-1 (Octoxynol) SB - IM MH - Animals MH - Brain/*ultrastructure MH - Cell Fractionation/*methods MH - *Cell Nucleus/chemistry/ultrastructure MH - Centrifugation MH - Chick Embryo MH - Hypoxia-Inducible Factor 1/biosynthesis MH - Microscopy, Immunoelectron MH - Nuclear Proteins/isolation & purification MH - Octoxynol MH - Sodium Dodecyl Sulfate MH - Solubility MH - Surface-Active Agents EDAT- 2009/05/23 09:00 MHDA- 2009/12/16 06:00 CRDT- 2009/05/23 09:00 PHST- 2009/03/25 00:00 [received] PHST- 2009/05/07 00:00 [accepted] PHST- 2009/05/23 09:00 [entrez] PHST- 2009/05/23 09:00 [pubmed] PHST- 2009/12/16 06:00 [medline] AID - 10.1007/s11064-009-9993-9 [doi] PST - ppublish SO - Neurochem Res. 2009 Nov;34(11):2022-9. doi: 10.1007/s11064-009-9993-9. Epub 2009 May 22.