PMID- 19535337 OWN - NLM STAT- MEDLINE DCOM- 20090928 LR - 20211020 IS - 0021-9258 (Print) IS - 1083-351X (Electronic) IS - 0021-9258 (Linking) VI - 284 IP - 32 DP - 2009 Aug 7 TI - Molecular mimicry in innate immunity: crystal structure of a bacterial TIR domain. PG - 21386-92 LID - 10.1074/jbc.C109.007591 [doi] AB - Macrophages detect pathogen infection via the activation of their plasma membrane-bound Toll-like receptor proteins (TLRs). The heterotypic interaction between the Toll/interleukin-1 receptor (TIR) domains of TLRs and adaptor proteins, like Myeloid differentiation primary response gene 88 (MyD88), is the first intracellular step in the signaling pathway of the mammalian innate immune response. The hetero-oligomerization of the TIRs of the receptor and adaptor brings about the activation of the transcription factor NF-kappaB, which regulates the synthesis of pro-inflammatory cytokines. Here, we report the first crystal structure of a bacterial TIR domain solved at 2.5 A resolution. The three-dimensional fold of Paracoccus denitrificans TIR is identical to that observed for the TIR of human TLRs and MyD88 proteins. The structure shows a unique dimerization interface involving the DD-loop and EE-loop residues, whereas leaving the BB-loop highly exposed. Peptide amide hydrogen-deuterium exchange mass spectrometry also reveals that the same region is used for dimerization in solution and in the context of the full-length protein. These results, together with a functional interaction between P. denitrificans TIR and MyD88 visualized in a co-immunoprecipitation assay, further substantiate the model that bacterial TIR proteins adopt structural mimicry of the host active receptor TIR domains to interfere with the signaling of TLRs and their adaptors to decrease the inflammatory response. FAU - Chan, Siew Leong AU - Chan SL AD - Inflammation and Infectious Diseases Center and Cancer Center, Burnham Institute for Medical Research, La Jolla, California 92037, USA. FAU - Low, Lieh Yoon AU - Low LY FAU - Hsu, Simon AU - Hsu S FAU - Li, Sheng AU - Li S FAU - Liu, Tong AU - Liu T FAU - Santelli, Eugenio AU - Santelli E FAU - Le Negrate, Gaelle AU - Le Negrate G FAU - Reed, John C AU - Reed JC FAU - Woods, Virgil L Jr AU - Woods VL Jr FAU - Pascual, Jaime AU - Pascual J LA - eng GR - R21 CA118595/CA/NCI NIH HHS/United States GR - R21 AI065602/AI/NIAID NIH HHS/United States GR - CA099835/CA/NCI NIH HHS/United States GR - R21AI065602/AI/NIAID NIH HHS/United States GR - R21 AI076961/AI/NIAID NIH HHS/United States GR - P01AI055789/AI/NIAID NIH HHS/United States GR - P01 AI055789/AI/NIAID NIH HHS/United States GR - R33 CA099835/CA/NCI NIH HHS/United States GR - AI076961/AI/NIAID NIH HHS/United States GR - CA118595/CA/NCI NIH HHS/United States GR - R21 CA099835/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural DEP - 20090617 PL - United States TA - J Biol Chem JT - The Journal of biological chemistry JID - 2985121R RN - 0 (Bacterial Proteins) RN - 0 (Cytokines) RN - 0 (MYD88 protein, human) RN - 0 (Myeloid Differentiation Factor 88) RN - 0 (Toll-Like Receptors) SB - IM MH - Bacterial Proteins/*chemistry MH - Crystallography, X-Ray/methods MH - Cytokines/metabolism MH - Dimerization MH - Escherichia coli/*metabolism MH - Humans MH - Immunoprecipitation MH - Inflammation MH - Models, Biological MH - Models, Molecular MH - Molecular Conformation MH - Myeloid Differentiation Factor 88/chemistry/*physiology MH - Paracoccus denitrificans/*metabolism MH - Protein Structure, Tertiary MH - Toll-Like Receptors/chemistry PMC - PMC2755863 EDAT- 2009/06/19 09:00 MHDA- 2009/09/29 06:00 PMCR- 2010/08/07 CRDT- 2009/06/19 09:00 PHST- 2009/06/19 09:00 [entrez] PHST- 2009/06/19 09:00 [pubmed] PHST- 2009/09/29 06:00 [medline] PHST- 2010/08/07 00:00 [pmc-release] AID - S0021-9258(18)49491-4 [pii] AID - C109.007591 [pii] AID - 10.1074/jbc.C109.007591 [doi] PST - ppublish SO - J Biol Chem. 2009 Aug 7;284(32):21386-92. doi: 10.1074/jbc.C109.007591. Epub 2009 Jun 17.