PMID- 19714869 OWN - NLM STAT- MEDLINE DCOM- 20091001 LR - 20151119 IS - 1535-3893 (Print) IS - 1535-3893 (Linking) VI - 8 IP - 4 DP - 2009 Apr TI - Selective expression of Syntaxin-7 protein in benign melanocytes and malignant melanoma. PG - 1639-46 LID - 10.1021/pr800745e [doi] AB - To search for proteins expressed in human melanocytes and melanoma, we employed an antibody-based proteomics strategy to screen for protein expression in tissue microarrays containing normal tissues, cancer tissues and cell lines. Syntaxin-7 (STX7) was identified as a novel protein, not previously characterized in cells of melanocytic lineage, displaying a cell type-specific protein expression pattern. In tumor tissues, STX7 was expressed in malignant melanoma and lymphoma. The protein was further characterized regarding subcellular localization, specificity, tissue distribution pattern and potential as a diagnostic and prognostic marker using cell lines and tissue microarrays containing normal skin, melanocytic nevi and primary and metastatic melanoma. STX7 was expressed in normal melanocytes, various benign melanocytic nevi, atypical nevi and malignant melanoma. Analysis in two independent melanoma cohorts demonstrated STX7 expression in nearly all investigated tumors, although at varying levels (> 90% positive tumors). The expression level of STX7 protein was inversely correlated to tumor stage, suggesting that decreased expression of STX7 is associated with more aggressive tumors. In conclusion, we present protein profiling data for a novel protein showing high sensitivity and specificity for cells of the melanocytic lineage. The presented antibody-based proteomics approach can be used as an effective strategy to identify novel tumor markers and evaluate their potential clinical relevance. FAU - Stromberg, Sara AU - Stromberg S AD - Department of Genetics and Pathology, Rudbeck Laboratory, Uppsala University, SE-75185 Uppsala, Sweden. FAU - Agnarsdottir, Margret AU - Agnarsdottir M FAU - Magnusson, Kristina AU - Magnusson K FAU - Rexhepaj, Elton AU - Rexhepaj E FAU - Bolander, Asa AU - Bolander A FAU - Lundberg, Emma AU - Lundberg E FAU - Asplund, Anna AU - Asplund A FAU - Ryan, Denise AU - Ryan D FAU - Rafferty, Mairin AU - Rafferty M FAU - Gallagher, William M AU - Gallagher WM FAU - Uhlen, Mathias AU - Uhlen M FAU - Bergqvist, Michael AU - Bergqvist M FAU - Ponten, Fredrik AU - Ponten F LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - J Proteome Res JT - Journal of proteome research JID - 101128775 RN - 0 (Biomarkers, Tumor) RN - 0 (Qa-SNARE Proteins) SB - IM MH - Biomarkers, Tumor/metabolism MH - Cell Line, Tumor MH - Humans MH - Melanocytes/*metabolism MH - Melanoma/*metabolism MH - Qa-SNARE Proteins/*metabolism MH - Skin/*metabolism MH - Skin Neoplasms/*metabolism EDAT- 2009/08/29 09:00 MHDA- 2009/10/02 06:00 CRDT- 2009/08/29 09:00 PHST- 2009/08/29 09:00 [entrez] PHST- 2009/08/29 09:00 [pubmed] PHST- 2009/10/02 06:00 [medline] AID - 10.1021/pr800745e [pii] AID - 10.1021/pr800745e [doi] PST - ppublish SO - J Proteome Res. 2009 Apr;8(4):1639-46. doi: 10.1021/pr800745e.