PMID- 19737651 OWN - NLM STAT- MEDLINE DCOM- 20090925 LR - 20131121 IS - 1873-4456 (Electronic) IS - 0165-4608 (Linking) VI - 194 IP - 1 DP - 2009 Oct TI - Molecular cytogenetic characterization of variant Philadelphia translocations in chronic myeloid leukemia: genesis and deletion of derivative chromosome 9. PG - 30-7 LID - 10.1016/j.cancergencyto.2009.05.010 [doi] AB - The mechanisms for the formation of variant Philadelphia (Ph) translocations that occur in 5-10% of patients with chronic myeloid leukemia (CML) are not fully characterized. Studies on the prognosis of these variant translocations have yielded conflicting results, especially regarding imatinib outcome and the status of deletions on the derivative chromosome 9. To shed light on these controversial subjects, we sought to analyze all variant translocation cases presented at diagnosis and identified in our institution between the years 2001 and 2008. Of 336 CML patients who presented at diagnosis and were studied by conventional cytogenetics and fluorescence in situ hybridization (FISH), 25 patients (7.44%) exhibited variant Ph-rearrangements. All chromosomes could be implicated in variant Ph rearrangements, with 32 breakpoints defined. Their distribution was located preferentially in the CG-richest regions of the genome. Deletions on der(9) were observed in 15 of the 25 cases (60%), a greater proportion in typical Ph translocations (12-15%). Both one- and two-step mechanisms were encountered in our series, as well as multiple-step mechanisms, which originate more complex rearrangements. Higher prevalence was observed for the two-step mechanism (56%). Proper assessment of the prognostic significance of variant translocations requires better categorization of these translocations based on their mechanisms of genesis and 9q34 deletion status. FAU - Bennour, Ayda AU - Bennour A AD - Cytogenetics Division, Department of Cytogenetics, Molecular Genetics, and Biology of Reproduction, Farhat Hached Hospital, Sousse 4000, Tunisia. aydabennour@yahoo.fr FAU - Sennana, Halima AU - Sennana H FAU - Laatiri, Mohamed Adnene AU - Laatiri MA FAU - Elloumi, Moez AU - Elloumi M FAU - Khelif, Abderrahim AU - Khelif A FAU - Saad, Ali AU - Saad A LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Cancer Genet Cytogenet JT - Cancer genetics and cytogenetics JID - 7909240 RN - EC 2.7.10.2 (Fusion Proteins, bcr-abl) SB - IM MH - Chromosome Banding MH - Chromosome Deletion MH - Chromosome Painting MH - Chromosomes, Human, Pair 1/genetics MH - Chromosomes, Human, Pair 17/genetics MH - Chromosomes, Human, Pair 22/genetics MH - Chromosomes, Human, Pair 9/genetics MH - Cytogenetic Analysis/*methods MH - Female MH - Fusion Proteins, bcr-abl/genetics MH - Genetic Variation MH - Humans MH - In Situ Hybridization, Fluorescence MH - Karyotyping MH - Leukemia, Myelogenous, Chronic, BCR-ABL Positive/*genetics/pathology MH - Male MH - *Philadelphia Chromosome MH - Translocation, Genetic/*genetics EDAT- 2009/09/10 06:00 MHDA- 2009/09/26 06:00 CRDT- 2009/09/10 06:00 PHST- 2009/03/05 00:00 [received] PHST- 2009/05/02 00:00 [revised] PHST- 2009/05/24 00:00 [accepted] PHST- 2009/09/10 06:00 [entrez] PHST- 2009/09/10 06:00 [pubmed] PHST- 2009/09/26 06:00 [medline] AID - S0165-4608(09)00290-8 [pii] AID - 10.1016/j.cancergencyto.2009.05.010 [doi] PST - ppublish SO - Cancer Genet Cytogenet. 2009 Oct;194(1):30-7. doi: 10.1016/j.cancergencyto.2009.05.010.