PMID- 19945923 OWN - NLM STAT- MEDLINE DCOM- 20100616 LR - 20211020 IS - 1878-0261 (Electronic) IS - 1574-7891 (Print) IS - 1574-7891 (Linking) VI - 4 IP - 2 DP - 2010 Apr TI - Aberrations of ERBB2 and TOP2A genes in breast cancer. PG - 161-8 LID - 10.1016/j.molonc.2009.11.001 [doi] AB - Copy number changes in TOP2A have frequently been linked to ERBB2 (HER2) amplified breast cancers. To study this relationship, copy number changes of ERBB2 and TOP2A were investigated by fluorescence in situ hybridization (FISH) in two cell lines; one characterized by having amplification of both genes and the other by having amplification of ERBB2 and deletion of TOP2A. The characteristics are compared to findings on paired ERBB2 and TOP2A data from 649 patients with invasive breast cancer from a previously published biomarker study. The physical localization of FISH signals in metaphase spreads from cell lines showed that simultaneous amplification is not a simple co-amplification of a whole amplicon containing both genes. Most gene signals are translocated to abnormal marker chromosomes. ERBB2 genes but not TOP2A genes are present in tandem amplicons, leading to a higher ERBB2 ratio. This observation was confirmed by patient FISH data: among 276 (43% of all patients) abnormal tumors, 67% had different ERBB2 and TOP2A status. ERBB2 amplification with normal TOP2A status was found in 36% of the abnormal tumors (15% of all patients). Simultaneous amplification of both genes was found in 28% of the abnormal tumors (12% of all patients) while TOP2A deletion and ERBB2 amplification was observed in 16% of the abnormal cases (8% of all patients). A small number of tumors had TOP2A amplification (4%) or deletion (6%) without simultaneous changes of the ERBB2 gene. ERBB2 deletion was also observed (5%) but only in tumors with simultaneous TOP2A deletion. The average gene/reference ratio was significantly different: 5.0 for TOP2A but 7.2 for ERBB2 in the amplified tumors (P<0.01). Amplification of the two genes may be caused by different mechanisms, leading to higher level of amplification for ERBB2 compared to TOP2A. In the majority of breast cancer patients, simultaneous aberration of ERBB2 and TOP2A is not explained by simple co-amplification. CI - Copyright 2009 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved. FAU - Nielsen, Kirsten Vang AU - Nielsen KV AD - Dako A/S, Glostrup, Denmark. kirsten.vang@dako.com FAU - Muller, Sven AU - Muller S FAU - Moller, Susanne AU - Moller S FAU - Schonau, Andreas AU - Schonau A FAU - Balslev, Eva AU - Balslev E FAU - Knoop, Ann S AU - Knoop AS FAU - Ejlertsen, Bent AU - Ejlertsen B LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20091118 PL - United States TA - Mol Oncol JT - Molecular oncology JID - 101308230 RN - 0 (Antigens, Neoplasm) RN - 0 (Biomarkers, Tumor) RN - 0 (DNA-Binding Proteins) RN - 0 (Poly-ADP-Ribose Binding Proteins) RN - EC 2.7.10.1 (ERBB2 protein, human) RN - EC 2.7.10.1 (Receptor, ErbB-2) RN - EC 5.99.1.3 (DNA Topoisomerases, Type II) RN - EC 5.99.1.3 (TOP2A protein, human) SB - IM MH - Antigens, Neoplasm/*genetics MH - Biomarkers, Tumor/genetics MH - Breast Neoplasms/*genetics/pathology MH - Cell Line, Tumor MH - Chromosomes, Human, Pair 17 MH - DNA Topoisomerases, Type II/*genetics MH - DNA-Binding Proteins/*genetics MH - Female MH - *Gene Amplification MH - Gene Deletion MH - Gene Dosage MH - Humans MH - In Situ Hybridization, Fluorescence MH - Metaphase MH - Poly-ADP-Ribose Binding Proteins MH - Receptor, ErbB-2/*genetics PMC - PMC5527893 EDAT- 2009/12/01 06:00 MHDA- 2010/06/17 06:00 PMCR- 2010/04/01 CRDT- 2009/12/01 06:00 PHST- 2009/09/02 00:00 [received] PHST- 2009/11/10 00:00 [revised] PHST- 2009/11/11 00:00 [accepted] PHST- 2009/12/01 06:00 [entrez] PHST- 2009/12/01 06:00 [pubmed] PHST- 2010/06/17 06:00 [medline] PHST- 2010/04/01 00:00 [pmc-release] AID - S1574-7891(09)00138-0 [pii] AID - MOL2201042161 [pii] AID - 10.1016/j.molonc.2009.11.001 [doi] PST - ppublish SO - Mol Oncol. 2010 Apr;4(2):161-8. doi: 10.1016/j.molonc.2009.11.001. Epub 2009 Nov 18.