PMID- 20104647 OWN - NLM STAT- MEDLINE DCOM- 20100416 LR - 20221207 IS - 1862-1783 (Electronic) IS - 1673-1581 (Print) IS - 1673-1581 (Linking) VI - 11 IP - 2 DP - 2010 Feb TI - Distributions of HLA-A and -B alleles and haplotypes in the Yi ethnic minority of Yunnan, China: relationship to other populations. PG - 127-35 LID - 10.1631/jzus.B0900232 [doi] AB - OBJECTIVE: To investigate the distributions of human leukocyte antigen (HLA)-A and -B alleles and HLA-A-B haplotypes in the Yi ethnic minority of the Yunnan Province, situated in southwestern China. METHODS: DNA typing for HLA-A and -B loci was performed using the polymerase chain reaction-sequence-based typing (PCR-SBT) method on 114 randomly selected healthy individuals of the Yi population. The allelic frequencies of HLA-A and -B loci were calculated by direct counting and HLA-A-B haplotypes were estimated using the expectation maximization algorithm. RESULTS: A total of 17 HLA-A and 38 HLA-B alleles were found in the Yi population. The most frequent alleles were A*2402 (32.46%), A*1101 (26.32%), and A*0203 (10.09%) at the HLA-A locus and B*4601 (12.28%), B*1525 (10.09%), B*4001 (8.77%), and B*3802 (7.89%) at the HLA-B locus. The predominant HLA-A-B haplotypes were A*2402-B*1525 (7.86%) and A*0203-B*3802 (5.64%), followed by A*1101-B*4001 (4.69%). Phylogenetic analysis indicates that the Yi population in the Honghe, Yunnan Province of China basically belongs to groups of southeastern Asian origin, but shares some characteristics with northeastern Asian groups. CONCLUSION: The present study may add to the understanding of HLA polymorphism in the Yi ethnic group that was poorly defined previously, and provide useful information for bone marrow transplantation, anthropological research, and forensic sciences as well as for disease-association studies. FAU - Zhu, Bo-feng AU - Zhu BF AD - Department of Forensic Medicine, School of Medicine, Xi'an Jiaotong University, Xi'an 710061, China. FAU - Yang, Guang AU - Yang G FAU - Shen, Chun-mei AU - Shen CM FAU - Qin, Hai-xia AU - Qin HX FAU - Liu, Shun-zhi AU - Liu SZ FAU - Deng, Ya-jun AU - Deng YJ FAU - Fan, Shuan-liang AU - Fan SL FAU - Deng, Li-bin AU - Deng LB FAU - Chen, Feng AU - Chen F FAU - Zhang, Ping AU - Zhang P FAU - Fang, Jie AU - Fang J FAU - Chen, Li-ping AU - Chen LP FAU - Wang, Hong-dan AU - Wang HD FAU - Wang, Zhen-yuan AU - Wang ZY FAU - Lucas, Rudolf AU - Lucas R LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - China TA - J Zhejiang Univ Sci B JT - Journal of Zhejiang University. Science. B JID - 101236535 RN - 0 (HLA-A Antigens) RN - 0 (HLA-B Antigens) SB - IM MH - Algorithms MH - Alleles MH - Asian People/*genetics MH - China MH - Ethnicity/*genetics MH - Gene Frequency MH - HLA-A Antigens/*genetics MH - HLA-B Antigens/*genetics MH - Haplotypes MH - Humans MH - Phylogeny PMC - PMC2816316 EDAT- 2010/01/28 06:00 MHDA- 2010/04/17 06:00 PMCR- 2010/02/01 CRDT- 2010/01/28 06:00 PHST- 2010/01/28 06:00 [entrez] PHST- 2010/01/28 06:00 [pubmed] PHST- 2010/04/17 06:00 [medline] PHST- 2010/02/01 00:00 [pmc-release] AID - 10.1631/jzus.B0900232 [doi] PST - ppublish SO - J Zhejiang Univ Sci B. 2010 Feb;11(2):127-35. doi: 10.1631/jzus.B0900232.