PMID- 20195541 OWN - NLM STAT- MEDLINE DCOM- 20100930 LR - 20181113 IS - 1932-6203 (Electronic) IS - 1932-6203 (Linking) VI - 5 IP - 2 DP - 2010 Feb 25 TI - Helper T cell epitope-mapping reveals MHC-peptide binding affinities that correlate with T helper cell responses to pneumococcal surface protein A. PG - e9432 LID - 10.1371/journal.pone.0009432 [doi] LID - e9432 AB - Understanding the requirements for protection against pneumococcal carriage and pneumonia will greatly benefit efforts in controlling these diseases. Several proteins and polysaccharide capsule have recently been implicated in the virulence of and protective immunity against Streptococcus pneumonia. Pneumococcal surface protein A (PspA) is highly conserved among S. pneumonia strains, inhibits complement activation, binds lactoferrin, elicits protective systemic immunity against pneumococcal infection, and is necessary for full pneumococcal virulence. Identification of PspA peptides that optimally bind human leukocyte antigen (HLA) would greatly contribute to global vaccine efforts, but this is hindered by the multitude of HLA polymorphisms. Here, we have used an experimental data set of 54 PspA peptides and in silico methods to predict peptide binding to HLA and murine major histocompatibility complex (MHC) class II. We also characterized spleen- and cervical lymph node (CLN)-derived helper T lymphocyte (HTL) cytokine responses to these peptides after S. pneumonia strain EF3030-challenge in mice. Individual, yet overlapping peptides, 15 amino acids in length revealed residues 199 to 246 of PspA (PspA(199-246)) consistently caused the greatest IFN-gamma, IL-2, IL-5 and proliferation as well as moderate IL-10 and IL-4 responses by ex vivo stimulated splenic and CLN CD4(+) T cells isolated from S. pneumonia strain EF3030-challeged F(1) (B6xBALB/c) mice. IEDB, RANKPEP, SVMHC, MHCPred, and SYFPEITHI in silico analysis tools revealed peptides in PspA(199-246) also interact with a broad range of HLA-DR, -DQ, and -DP allelles. These data suggest that predicted MHC class II-peptide binding affinities do not always correlate with T helper (Th) cytokine or proliferative responses to PspA peptides, but when used together with in vivo validation can be a useful tool to choose candidate pneumococcal HTL epitopes. FAU - Singh, Rajesh AU - Singh R AD - Department of Microbiology, Biochemistry, and Immunology, Morehouse School of Medicine, Atlanta, Georgia, United States of America. FAU - Singh, Shailesh AU - Singh S FAU - Sharma, Praveen K AU - Sharma PK FAU - Singh, Udai P AU - Singh UP FAU - Briles, David E AU - Briles DE FAU - Hollingshead, Susan K AU - Hollingshead SK FAU - Lillard, James W Jr AU - Lillard JW Jr LA - eng GR - G12 RR003034/RR/NCRR NIH HHS/United States GR - MD00525/MD/NIMHD NIH HHS/United States GR - P60 MD000525/MD/NIMHD NIH HHS/United States GR - AI057808/AI/NIAID NIH HHS/United States GR - GM09248/GM/NIGMS NIH HHS/United States GR - RR03034/RR/NCRR NIH HHS/United States GR - R01 AI057808/AI/NIAID NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural DEP - 20100225 PL - United States TA - PLoS One JT - PloS one JID - 101285081 RN - 0 (Bacterial Proteins) RN - 0 (Cytokines) RN - 0 (Epitopes, T-Lymphocyte) RN - 0 (Histocompatibility Antigens) RN - 0 (Histocompatibility Antigens Class II) RN - 0 (Peptides) RN - 0 (pneumococcal surface protein A) SB - IM MH - Amino Acid Sequence MH - Animals MH - Bacterial Proteins/*immunology/metabolism MH - Binding, Competitive MH - CD4-Positive T-Lymphocytes/cytology/immunology/metabolism MH - Cell Proliferation MH - Cytokines/metabolism MH - Epitope Mapping MH - Epitopes, T-Lymphocyte/*immunology/metabolism MH - Female MH - Histocompatibility Antigens/genetics/immunology/metabolism MH - Histocompatibility Antigens Class II/genetics/immunology/metabolism MH - Humans MH - Male MH - Mice MH - Mice, Inbred BALB C MH - Mice, Inbred Strains MH - Molecular Sequence Data MH - Peptides/genetics/*immunology/metabolism MH - Pneumococcal Infections/immunology/microbiology MH - Protein Binding MH - Streptococcus pneumoniae/genetics/immunology/metabolism MH - T-Lymphocytes, Helper-Inducer/cytology/*immunology/metabolism PMC - PMC2828482 COIS- Competing Interests: The authors have declared that no competing interests exist. EDAT- 2010/03/03 06:00 MHDA- 2010/10/01 06:00 PMCR- 2010/02/25 CRDT- 2010/03/03 06:00 PHST- 2009/09/10 00:00 [received] PHST- 2010/02/02 00:00 [accepted] PHST- 2010/03/03 06:00 [entrez] PHST- 2010/03/03 06:00 [pubmed] PHST- 2010/10/01 06:00 [medline] PHST- 2010/02/25 00:00 [pmc-release] AID - 09-PONE-RA-12807R1 [pii] AID - 10.1371/journal.pone.0009432 [doi] PST - epublish SO - PLoS One. 2010 Feb 25;5(2):e9432. doi: 10.1371/journal.pone.0009432.