PMID- 20300178 OWN - NLM STAT- MEDLINE DCOM- 20110111 LR - 20211020 IS - 1932-6203 (Electronic) IS - 1932-6203 (Linking) VI - 5 IP - 3 DP - 2010 Mar 11 TI - A novel translocation breakpoint within the BPTF gene is associated with a pre-malignant phenotype. PG - e9657 LID - 10.1371/journal.pone.0009657 [doi] LID - e9657 AB - Partial gain of chromosome arm 17q is an abundant aberrancy in various cancer types such as lung and prostate cancer with a prominent occurrence and prognostic significance in neuroblastoma--one of the most common embryonic tumors. The specific genetic element/s in 17q responsible for the cancer-promoting effect of these aberrancies is yet to be defined although many genes located in 17q have been proposed to play a role in malignancy. We report here the characterization of a naturally-occurring, non-reciprocal translocation der(X)t(X;17) in human lung embryonal-derived cells following continuous culturing. This aberrancy was strongly correlated with an increased proliferative capacity and with an acquired ability to form colonies in vitro. The breakpoint region was mapped by fluorescence in situ hybridization (FISH) to the 17q24.3 locus. Further characterization by a custom-made comparative genome hybridization array (CGH) localized the breakpoint within the Bromodomain PHD finger Transcription Factor gene (BPTF), a gene involved in transcriptional regulation and chromatin remodeling. Interestingly, this translocation led to elevation in the mRNA levels of the endogenous BPTF. Knock-down of BPTF restricted proliferation suggesting a role for BPTF in promoting cellular growth. Furthermore, the BPTF chromosomal region was found to be amplified in various human tumors, especially in neuroblastomas and lung cancers in which 55% and 27% of the samples showed gain of 17q24.3, respectively. Additionally, 42% percent of the cancer cell lines comprising the NCI-60 had an abnormal BPTF locus copy number. We suggest that deregulation of BPTF resulting from the translocation may confer the cells with the observed cancer-promoting phenotype and that our cellular model can serve to establish causality between 17q aberrations and carcinogenesis. FAU - Buganim, Yosef AU - Buganim Y AD - Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel. FAU - Goldstein, Ido AU - Goldstein I FAU - Lipson, Doron AU - Lipson D FAU - Milyavsky, Michael AU - Milyavsky M FAU - Polak-Charcon, Sylvie AU - Polak-Charcon S FAU - Mardoukh, Corine AU - Mardoukh C FAU - Solomon, Hilla AU - Solomon H FAU - Kalo, Eyal AU - Kalo E FAU - Madar, Shalom AU - Madar S FAU - Brosh, Ran AU - Brosh R FAU - Perelman, Marina AU - Perelman M FAU - Navon, Roy AU - Navon R FAU - Goldfinger, Naomi AU - Goldfinger N FAU - Barshack, Iris AU - Barshack I FAU - Yakhini, Zohar AU - Yakhini Z FAU - Rotter, Varda AU - Rotter V LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20100311 PL - United States TA - PLoS One JT - PloS one JID - 101285081 RN - 0 (Antigens, Nuclear) RN - 0 (Carcinogens) RN - 0 (Nerve Tissue Proteins) RN - 0 (Transcription Factors) RN - 0 (fetal Alzheimer antigen) SB - IM MH - Antigens, Nuclear/*metabolism MH - Base Sequence MH - Carcinogens MH - Cell Proliferation MH - Chromosomes, Human, Pair 17 MH - Comparative Genomic Hybridization/methods MH - Humans MH - In Situ Hybridization, Fluorescence MH - Lung/embryology MH - Lung Neoplasms/genetics MH - Models, Genetic MH - Molecular Sequence Data MH - Nerve Tissue Proteins/*metabolism MH - Neuroblastoma/metabolism MH - Phenotype MH - Protein Structure, Tertiary MH - Transcription Factors/*metabolism MH - *Translocation, Genetic MH - Trisomy PMC - PMC2836376 COIS- Competing Interests: Two of the authors of this manuscript (Dr. Yakhini and Mr. Navon) are employed by Agilent Technologies. Dr. Yakhini designed the probes that were used in the CGH array and analyzed the results. Mr. Navon analyzed the BPTF gene dosage in the NCI-60 cell lines. Agilent Technologies received full payment for Dr. Yakhini's and Mr. Navon's contribution to the manuscript. The authors declare that no patents and/or products in development or marketed products are associated with this manuscript. EDAT- 2010/03/20 06:00 MHDA- 2011/01/12 06:00 PMCR- 2010/03/11 CRDT- 2010/03/20 06:00 PHST- 2009/12/23 00:00 [received] PHST- 2010/02/20 00:00 [accepted] PHST- 2010/03/20 06:00 [entrez] PHST- 2010/03/20 06:00 [pubmed] PHST- 2011/01/12 06:00 [medline] PHST- 2010/03/11 00:00 [pmc-release] AID - 09-PONE-RA-15153R1 [pii] AID - 10.1371/journal.pone.0009657 [doi] PST - epublish SO - PLoS One. 2010 Mar 11;5(3):e9657. doi: 10.1371/journal.pone.0009657.