PMID- 20399272 OWN - NLM STAT- MEDLINE DCOM- 20101207 LR - 20211020 IS - 1096-0279 (Electronic) IS - 1046-5928 (Print) IS - 1046-5928 (Linking) VI - 74 IP - 1 DP - 2010 Nov TI - Functional expression, purification and high sequence coverage mass spectrometric characterization of human excitatory amino acid transporter EAAT2. PG - 49-59 LID - 10.1016/j.pep.2010.04.006 [doi] AB - The glial excitatory amino acid transporter 2 (EAAT2) mediates a majority of glutamate re-uptake in human CNS and, consequently, is associated with a variety of signaling and pathological processes. While our understanding of the function, mechanism and structure of this integral membrane protein is increasing, little if any mass spectrometric (MS) data is available for any of the EAATs specifically, and for only a few mammalian plasma membrane transporters in general. A protocol to express and purify functional EAAT2 in sufficient quantities to carry out MS-based peptide mapping as needed to study ligand-transporter interactions is described. A 6xHIS epitope was incorporated into the N-terminus of human EAAT2. The recombinant protein was expressed in high levels in mammalian HEK 293T cells, where it exhibited the pharmacological properties of the native transporter. EAAT2 was purified from isolated cell membranes in a single step using nickel affinity chromatography. In-gel and in-solution trypsin digestions were conducted on the isolated protein and then analyzed by MALDI-TOF and LC-MS/MS mass spectrometry. Overall, 89% sequence coverage of the protein was achieved with these methods. In particular, an 88 amino acid tryptic peptide covering the presumed substrate binding domains HP1, TMD7, HP2, and TMD8 domains of EAAT2 was also identified after N-deglycosylation. Beyond the specific applicability to EAAT2, this study provides an efficient, simple and scalable approach to express, purify, digest and characterize integral membrane transporter proteins by mass spectrometry. CI - Copyright 2010. Published by Elsevier Inc. FAU - Ye, Ran AU - Ye R AD - Center for Structural and Functional Neuroscience, Department of Chemistry and Biochemistry, The University of Montana, Missoula, MT 59812, USA. FAU - Rhoderick, Joseph F AU - Rhoderick JF FAU - Thompson, Charles M AU - Thompson CM FAU - Bridges, Richard J AU - Bridges RJ LA - eng GR - P20 RR015583/RR/NCRR NIH HHS/United States GR - R01 NS030570/NS/NINDS NIH HHS/United States GR - P20 RR15583/RR/NCRR NIH HHS/United States GR - NS30570/NS/NINDS NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural DEP - 20100422 PL - United States TA - Protein Expr Purif JT - Protein expression and purification JID - 9101496 RN - 0 (Excitatory Amino Acid Transporter 2) RN - EC 3.4.21.4 (Trypsin) SB - IM MH - Amino Acid Sequence MH - Cell Line MH - Cell Membrane/metabolism MH - Electrophoresis, Polyacrylamide Gel MH - Excitatory Amino Acid Transporter 2/*chemistry/*genetics/isolation & purification/metabolism MH - *Gene Expression MH - Humans MH - Molecular Sequence Data MH - Solubility MH - Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization MH - Trypsin/metabolism PMC - PMC4356123 MID - NIHMS666441 EDAT- 2010/04/20 06:00 MHDA- 2010/12/14 06:00 PMCR- 2015/03/11 CRDT- 2010/04/20 06:00 PHST- 2010/03/05 00:00 [received] PHST- 2010/04/08 00:00 [revised] PHST- 2010/04/09 00:00 [accepted] PHST- 2010/04/20 06:00 [entrez] PHST- 2010/04/20 06:00 [pubmed] PHST- 2010/12/14 06:00 [medline] PHST- 2015/03/11 00:00 [pmc-release] AID - S1046-5928(10)00110-5 [pii] AID - 10.1016/j.pep.2010.04.006 [doi] PST - ppublish SO - Protein Expr Purif. 2010 Nov;74(1):49-59. doi: 10.1016/j.pep.2010.04.006. Epub 2010 Apr 22.