PMID- 20650296 OWN - NLM STAT- MEDLINE DCOM- 20110505 LR - 20111117 IS - 1879-1166 (Electronic) IS - 0198-8859 (Linking) VI - 71 IP - 11 DP - 2010 Nov TI - Human leukocyte antigen-G allele polymorphisms have evolved following three different evolutionary lineages based on intron sequences. PG - 1109-15 LID - 10.1016/j.humimm.2010.07.003 [doi] AB - Human leukocyte antigen (HLA)-G alleles follow a different pattern of polymorphism generation from those of the HLA classical I alleles. These polymorphisms have been defined as a result of random permitted point mutations in exons. However, this polymorphism maintenance could have an evolutionary specific pathways based on noncoding regions as introns, 14-bp deletion/insertion (exon 8), or promoter regions. Therefore a systematic sequencing study of HLA-G alleles was done obtaining the complete genomic sequence of 16 different HLA-G alleles: nine alleles were intron and exon confirmatory sequences, four were exon confirmatory and new intron described sequences, and three were new alleles. A 14-bp deletion/insertion polymorphism was also sequenced in these alleles. These sequences, together with those previously published, were compared, and phylogenetic and molecular evolutionary analyses were performed. Results showed the presence of three major specific evolutionary patterns, tentatively named lineages, and the other four as minor lineages (only one allele). The relative age of the major lineages could also be established based on the number of lineage-specific positions and the number of alleles of each lineage. Two main mechanisms are clearly defined in the generation of the lineages (introns), gene conversion, and/or convergent evolution following specific patterns. CI - Copyright (c) 2010 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved. FAU - Cervera, Isabel AU - Cervera I AD - Unidad de Inmunoterapia Celular, Centro Nacional de Microbiologia, Instituto de Salud Carlos III, Madrid, Spain. FAU - Herraiz, Miguel Angel AU - Herraiz MA FAU - Penaloza, Jorge AU - Penaloza J FAU - Barbolla, Maria Luz AU - Barbolla ML FAU - Jurado, Maria Luisa AU - Jurado ML FAU - Macedo, Jacqueline AU - Macedo J FAU - Vidart, Jose Antonio AU - Vidart JA FAU - Martinez-Laso, Jorge AU - Martinez-Laso J LA - eng PT - Comparative Study PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20100802 PL - United States TA - Hum Immunol JT - Human immunology JID - 8010936 RN - 0 (HLA Antigens) RN - 0 (HLA-G Antigens) RN - 0 (Histocompatibility Antigens Class I) SB - IM MH - *Alleles MH - Base Sequence MH - Evolution, Molecular MH - HLA Antigens/*genetics MH - HLA-G Antigens MH - Histocompatibility Antigens Class I/*genetics MH - Humans MH - Inteins/*genetics MH - Molecular Sequence Data MH - Phylogeny MH - Polymorphism, Genetic EDAT- 2010/07/24 06:00 MHDA- 2011/05/06 06:00 CRDT- 2010/07/24 06:00 PHST- 2010/02/24 00:00 [received] PHST- 2010/06/24 00:00 [revised] PHST- 2010/07/12 00:00 [accepted] PHST- 2010/07/24 06:00 [entrez] PHST- 2010/07/24 06:00 [pubmed] PHST- 2011/05/06 06:00 [medline] AID - S0198-8859(10)00438-6 [pii] AID - 10.1016/j.humimm.2010.07.003 [doi] PST - ppublish SO - Hum Immunol. 2010 Nov;71(11):1109-15. doi: 10.1016/j.humimm.2010.07.003. Epub 2010 Aug 2.