PMID- 2065053 OWN - NLM STAT- MEDLINE DCOM- 19910812 LR - 20190613 IS - 0006-2960 (Print) IS - 0006-2960 (Linking) VI - 30 IP - 27 DP - 1991 Jul 9 TI - Deciphering the structural elements of hirudin C-terminal peptide that bind to the fibrinogen recognition site of alpha-thrombin. PG - 6656-61 AB - The C-terminal peptide of a hirudin acts as an anticoagulant by binding specifically to a noncatalytic (fibrinogen recognition) site of thrombin. This binding has been shown to shield five spatially distant lysines of the thrombin B-chain (Lys21, Lys65, Lys77, Lys106, and Lys107). It was also demonstrated that modification of the sequence of the hirudin C-terminal peptide invariably diminished its anticoagulant activity. The major object of this study is to investigate how the decreased activity of the modified hirudin C-terminal peptide is reflected by the change of its binding properties to these five lysines of thrombin. A synthetic peptide representing the last 12 C-terminal amino acids of hirudin (Hir54-65) was (1) truncated from both its N-terminal and its C-terminal ends, or (2) substituted with Gly along residues 57-62, or (3) chemically modified to add (sulfation at Tyr63) or abolish (Asp and Glu modification with carbodiimide/glycinamide) its negatively charged side chains. The binding characteristics of these peptides to thrombin were investigated by chemical methods, and their corresponding anticoagulant activities were studied. Our results demonstrated the following: (1) the anticoagulant activities of hirudin C-terminal peptides were quantitatively related to their abilities to shield the five identified lysines of thrombin. The most potent peptide was sulfated Hir54-65 (S-Hir54-65) with an average binding affinity to the five lysines of 120 nM. A heptapeptide (Hir54-60) also displayed anticoagulant activity and thrombin binding ability at micromolar concentrations. (2) All active hirudin C-terminal peptides regardless of their sizes and potencies were shown to be capable of shielding the five lysines of thrombin.(ABSTRACT TRUNCATED AT 250 WORDS) FAU - Chang, J Y AU - Chang JY AD - Pharmaceuticals Research Laboratory, Ciba-Geigy Ltd., Basel, Switzerland. LA - eng PT - Journal Article PL - United States TA - Biochemistry JT - Biochemistry JID - 0370623 RN - 0 (Anticoagulants) RN - 0 (Hirudins) RN - 0 (Peptide Fragments) RN - 9001-32-5 (Fibrinogen) RN - EC 3.4.21.4 (Trypsin) RN - EC 3.4.21.5 (Thrombin) SB - IM MH - Amino Acid Sequence MH - Anticoagulants MH - Chromatography, High Pressure Liquid MH - Fibrinogen/*metabolism MH - Hirudins/genetics/*metabolism/pharmacology MH - Humans MH - Molecular Sequence Data MH - Peptide Fragments/*metabolism/pharmacology MH - Peptide Mapping MH - Substrate Specificity MH - Thrombin/*metabolism MH - Trypsin EDAT- 1991/07/09 00:00 MHDA- 1991/07/09 00:01 CRDT- 1991/07/09 00:00 PHST- 1991/07/09 00:00 [pubmed] PHST- 1991/07/09 00:01 [medline] PHST- 1991/07/09 00:00 [entrez] AID - 10.1021/bi00241a004 [doi] PST - ppublish SO - Biochemistry. 1991 Jul 9;30(27):6656-61. doi: 10.1021/bi00241a004.