PMID- 20697093 OWN - NLM STAT- MEDLINE DCOM- 20101102 LR - 20220415 IS - 1527-7755 (Electronic) IS - 0732-183X (Linking) VI - 28 IP - 28 DP - 2010 Oct 1 TI - Human epidermal growth factor receptor 2 assessment in a case-control study: comparison of fluorescence in situ hybridization and quantitative reverse transcription polymerase chain reaction performed by central laboratories. PG - 4300-6 LID - 10.1200/JCO.2009.24.8211 [doi] AB - PURPOSE: The optimal method to assess human epidermal growth factor receptor 2 (HER2) status remains highly controversial. Before reporting patient HER2 results, American Society of Clinical Oncology (ASCO)/College of American Pathologists (CAP) guidelines mandate that laboratories demonstrate >/= 95% concordance to another approved laboratory or methodology. Here, we compare central laboratory HER2 assessed by fluorescence in situ hybridization (FISH) and quantitative reverse transcriptase polymerase chain reaction (RT-PCR) using Oncotype DX in lymph node-negative, chemotherapy-untreated patients from a large Kaiser Permanente case-control study. PATIENTS AND METHODS: Breast cancer specimens from the Kaiser-Genomic Health study were examined. Central FISH assessment of HER2 amplification and polysomy 17 was conducted by PhenoPath Laboratories (ratios > 2.2, 1.8 to 2.2, and < 1.8 define HER2 positive, HER2 equivocal, and HER2 negative, respectively). HER2 expression by RT-PCR was conducted using Oncotype DX by Genomic Health (normalized expression units >/= 11.5, 10.7 to < 11.5, and < 10.7 define HER2 positive, HER2 equivocal, and HER2 negative, respectively). Concordance analyses followed ASCO/CAP guidelines. RESULTS: HER2 concordance by central FISH and central RT-PCR was 97% (95% CI, 96% to 99%). Twelve percent (67 of 568 patients) and 11% (60 of 568 patients) of patients were HER2 positive by RT-PCR and FISH, respectively. HER2-positive patients had increased odds of dying from breast cancer compared with HER2-negative patients. Polysomy 17 was demonstrated in 12.5% of all patients and 33% of FISH-positive patients. Nineteen of 20 FISH-positive patients with polysomy 17 were also RT-PCR HER2 positive. Although not statistically significantly different, HER2-positive/polysomy 17 patients tended to have the worst prognosis, followed by HER2-positive/eusomic, HER2-negative/polysomy 17, and HER2-negative/eusomic patients. CONCLUSION: There is a high degree of concordance between central FISH and quantitative RT-PCR using Oncotype DX for HER2 status, and the assay warrants additional study in a trastuzumab-treated population. FAU - Baehner, Frederick L AU - Baehner FL AD - University of California, San Francisco, 1600 Divisadero St, Rm R200, San Francisco, CA 94063, USA. rbaehner@genomichealth.com FAU - Achacoso, Ninah AU - Achacoso N FAU - Maddala, Tara AU - Maddala T FAU - Shak, Steve AU - Shak S FAU - Quesenberry, Charles P Jr AU - Quesenberry CP Jr FAU - Goldstein, Lynn C AU - Goldstein LC FAU - Gown, Allen M AU - Gown AM FAU - Habel, Laurel A AU - Habel LA LA - eng PT - Comparative Study PT - Journal Article DEP - 20100809 PL - United States TA - J Clin Oncol JT - Journal of clinical oncology : official journal of the American Society of Clinical Oncology JID - 8309333 RN - 0 (Biomarkers, Tumor) RN - EC 2.7.10.1 (Receptor, ErbB-2) SB - IM CIN - J Clin Oncol. 2010 Oct 1;28(28):4289-92. PMID: 20697080 CIN - J Clin Oncol. 2010 Oct 1;28(28):4293-5. PMID: 20697085 CIN - J Clin Oncol. 2012 Feb 10;30(5):570-1. PMID: 22231038 MH - Adult MH - Biomarkers, Tumor/metabolism MH - Breast Neoplasms/*diagnosis/genetics/metabolism/mortality MH - California/epidemiology MH - Case-Control Studies MH - Chromosomes, Human, Pair 17 MH - False Negative Reactions MH - False Positive Reactions MH - Female MH - Humans MH - In Situ Hybridization, Fluorescence/*methods MH - Laboratories MH - Logistic Models MH - Middle Aged MH - Pathology, Clinical MH - Prognosis MH - Receptor, ErbB-2/*metabolism MH - Registries MH - Reverse Transcriptase Polymerase Chain Reaction/*methods MH - Sensitivity and Specificity EDAT- 2010/08/11 06:00 MHDA- 2010/11/03 06:00 CRDT- 2010/08/11 06:00 PHST- 2010/08/11 06:00 [entrez] PHST- 2010/08/11 06:00 [pubmed] PHST- 2010/11/03 06:00 [medline] AID - JCO.2009.24.8211 [pii] AID - 10.1200/JCO.2009.24.8211 [doi] PST - ppublish SO - J Clin Oncol. 2010 Oct 1;28(28):4300-6. doi: 10.1200/JCO.2009.24.8211. Epub 2010 Aug 9.