PMID- 20934997 OWN - NLM STAT- MEDLINE DCOM- 20110526 LR - 20211020 IS - 1592-8721 (Electronic) IS - 0390-6078 (Print) IS - 0390-6078 (Linking) VI - 96 IP - 1 DP - 2011 Jan TI - The impact of human leukocyte antigen (HLA) micropolymorphism on ligand specificity within the HLA-B*41 allotypic family. PG - 110-8 LID - 10.3324/haematol.2010.030924 [doi] AB - BACKGROUND: Polymorphic differences between human leukocyte antigen (HLA) molecules affect the specificity and conformation of their bound peptides and lead to differential selection of the T-cell repertoire. Mismatching during allogeneic transplantation can, therefore, lead to immunological reactions. DESIGN AND METHODS: We investigated the structure-function relationships of six members of the HLA-B*41 allelic group that differ by six polymorphic amino acids, including positions 80, 95, 97 and 114 within the antigen-binding cleft. Peptide-binding motifs for B*41:01, *41:02, *41:03, *41:04, *41:05 and *41:06 were determined by sequencing self-peptides from recombinant B*41 molecules by electrospray ionization tandem mass spectrometry. The crystal structures of HLA-B*41:03 bound to a natural 16-mer self-ligand (AEMYGSVTEHPSPSPL) and HLA-B*41:04 bound to a natural 11-mer self-ligand (HEEAVSVDRVL) were solved. RESULTS: Peptide analysis revealed that all B*41 alleles have an identical anchor motif at peptide position 2 (glutamic acid), but differ in their choice of C-terminal pOmega anchor (proline, valine, leucine). Additionally, B*41:04 displayed a greater preference for long peptides (>10 residues) when compared to the other B*41 allomorphs, while the longest peptide to be eluted from the allelic group (a 16mer) was obtained from B*41:03. The crystal structures of HLA-B*41:03 and HLA-B*41:04 revealed that both alleles interact in a highly conserved manner with the terminal regions of their respective ligands, while micropolymorphism-induced changes in the steric and electrostatic properties of the antigen-binding cleft account for differences in peptide repertoire and auxiliary anchoring. CONCLUSIONS: Differences in peptide repertoire, and peptide length specificity reflect the significant functional evolution of these closely related allotypes and signal their importance in allogeneic transplantation, especially B*41:03 and B*41:04, which accommodate longer peptides, creating structurally distinct peptide-HLA complexes. FAU - Bade-Doding, Christina AU - Bade-Doding C AD - Institute for Transfusion Medicine, Hannover Medical School, Hannover, Germany. FAU - Theodossis, Alex AU - Theodossis A FAU - Gras, Stephanie AU - Gras S FAU - Kjer-Nielsen, Lars AU - Kjer-Nielsen L FAU - Eiz-Vesper, Britta AU - Eiz-Vesper B FAU - Seltsam, Axel AU - Seltsam A FAU - Huyton, Trevor AU - Huyton T FAU - Rossjohn, Jamie AU - Rossjohn J FAU - McCluskey, James AU - McCluskey J FAU - Blasczyk, Rainer AU - Blasczyk R LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20101007 PL - Italy TA - Haematologica JT - Haematologica JID - 0417435 RN - 0 (Epitopes, T-Lymphocyte) RN - 0 (HLA-B Antigens) RN - 0 (HLA-B41 antigen) RN - 0 (Peptide Fragments) RN - 0 (Recombinant Proteins) SB - IM MH - Epitopes, T-Lymphocyte/*genetics MH - HLA-B Antigens/chemistry/*genetics/metabolism MH - Humans MH - Peptide Fragments/*immunology/metabolism MH - Polymorphism, Single Nucleotide/*genetics MH - Protein Binding MH - Protein Conformation MH - Recombinant Proteins/chemistry/*genetics/metabolism MH - Spectrometry, Mass, Electrospray Ionization MH - T-Lymphocytes, Cytotoxic/immunology PMC - PMC3012774 EDAT- 2010/10/12 06:00 MHDA- 2011/05/27 06:00 PMCR- 2011/01/01 CRDT- 2010/10/12 06:00 PHST- 2010/10/12 06:00 [entrez] PHST- 2010/10/12 06:00 [pubmed] PHST- 2011/05/27 06:00 [medline] PHST- 2011/01/01 00:00 [pmc-release] AID - haematol.2010.030924 [pii] AID - 0960110 [pii] AID - 10.3324/haematol.2010.030924 [doi] PST - ppublish SO - Haematologica. 2011 Jan;96(1):110-8. doi: 10.3324/haematol.2010.030924. Epub 2010 Oct 7.