PMID- 21204226 OWN - NLM STAT- MEDLINE DCOM- 20110517 LR - 20200930 IS - 1552-4833 (Electronic) IS - 1552-4825 (Linking) VI - 155A IP - 1 DP - 2011 Jan TI - Contractions in the second polyA tract of ARX are rare, non-pathogenic polymorphisms. PG - 164-7 LID - 10.1002/ajmg.a.33753 [doi] AB - Aristaless related homeobox (ARX) is a transcription factor containing highly conserved octapeptide, homeobox, acidic, and aristaless domains, as well as four polyA tracts. The most frequent ARX mutation found to date in patients with X-linked infantile spasms, Partington syndrome or X-linked mental retardation, is a duplication of 24 bp in exon 2, resulting in the expansion of the second polyA tract. Although the pathogenic role of this expansion has been well characterized, the effect of contractions in the same polyA tract is still debated since different reports have associated contractions to either mental retardation or a normal phenotype. Here, we report two unrelated girls with epilepsy and mental retardation who inherited from their unaffected parents, of either sex, a deletion of 24 bp (c.441_464del), resulting in a contraction of eight alanines in the second polyA tract of ARX. Segregation studies revealed the c.441_464del also in two healthy relatives of one of the patients. This finding supports the hypothesis that this contraction represents a rare, benign polymorphism. CI - Copyright (c) 2010 Wiley-Liss, Inc. FAU - Conti, Valerio AU - Conti V AD - Children's Hospital A. Meyer, University of Florence, Firenze, Italy. FAU - Marini, Carla AU - Marini C FAU - Mei, Davide AU - Mei D FAU - Falchi, Melania AU - Falchi M FAU - Ferrari, Anna Rita AU - Ferrari AR FAU - Guerrini, Renzo AU - Guerrini R LA - eng PT - Case Reports PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20101210 PL - United States TA - Am J Med Genet A JT - American journal of medical genetics. Part A JID - 101235741 RN - 0 (ARX protein, human) RN - 0 (Homeodomain Proteins) RN - 0 (Transcription Factors) RN - 24937-83-5 (Poly A) SB - IM MH - Base Sequence MH - Child MH - Epilepsy/*genetics MH - Female MH - Homeodomain Proteins/*genetics MH - Humans MH - Intellectual Disability/*genetics MH - Molecular Sequence Data MH - Pedigree MH - Poly A/*genetics MH - Polymorphism, Genetic/*genetics MH - Sequence Analysis, DNA MH - Sequence Deletion/*genetics MH - Transcription Factors/*genetics EDAT- 2011/01/05 06:00 MHDA- 2011/05/18 06:00 CRDT- 2011/01/05 06:00 PHST- 2010/08/05 00:00 [received] PHST- 2010/09/06 00:00 [accepted] PHST- 2011/01/05 06:00 [entrez] PHST- 2011/01/05 06:00 [pubmed] PHST- 2011/05/18 06:00 [medline] AID - 10.1002/ajmg.a.33753 [doi] PST - ppublish SO - Am J Med Genet A. 2011 Jan;155A(1):164-7. doi: 10.1002/ajmg.a.33753. Epub 2010 Dec 10.