PMID- 21483490 OWN - NLM STAT- MEDLINE DCOM- 20111212 LR - 20220129 IS - 1553-7374 (Electronic) IS - 1553-7366 (Print) IS - 1553-7366 (Linking) VI - 7 IP - 3 DP - 2011 Mar TI - Novel escape mutants suggest an extensive TRIM5alpha binding site spanning the entire outer surface of the murine leukemia virus capsid protein. PG - e1002011 LID - 10.1371/journal.ppat.1002011 [doi] LID - e1002011 AB - After entry into target cells, retroviruses encounter the host restriction factors such as Fv1 and TRIM5alpha. While it is clear that these factors target retrovirus capsid proteins (CA), recognition remains poorly defined in the absence of structural information. To better understand the binding interaction between TRIM5alpha and CA, we selected a panel of novel N-tropic murine leukaemia virus (N-MLV) escape mutants by a serial passage of replication competent N-MLV in rhesus macaque TRIM5alpha (rhTRIM5alpha)-positive cells using a small percentage of unrestricted cells to allow multiple rounds of virus replication. The newly identified mutations, many of which involve changes in charge, are distributed over the outer 'top' surface of N-MLV CA, including the N-terminal beta-hairpin, and map up to 29 A(o) apart. Biological characterisation with a number of restriction factors revealed that only one of the new mutations affects restriction by human TRIM5alpha, indicating significant differences in the binding interaction between N-MLV and the two TRIM5alphas, whereas three of the mutations result in dual sensitivity to Fv1(n) and Fv1(b). Structural studies of two mutants show that no major changes in the overall CA conformation are associated with escape from restriction. We conclude that interactions involving much, if not all, of the surface of CA are vital for TRIM5alpha binding. FAU - Ohkura, Sadayuki AU - Ohkura S AD - Division of Virology, MRC National Institute for Medical Research, London, United Kingdom. FAU - Goldstone, David C AU - Goldstone DC FAU - Yap, Melvyn W AU - Yap MW FAU - Holden-Dye, Kate AU - Holden-Dye K FAU - Taylor, Ian A AU - Taylor IA FAU - Stoye, Jonathan P AU - Stoye JP LA - eng SI - PDB/2Y4Z GR - MC_U117512710/MRC_/Medical Research Council/United Kingdom GR - MC_U117565647/MRC_/Medical Research Council/United Kingdom PT - Journal Article DEP - 20110331 PL - United States TA - PLoS Pathog JT - PLoS pathogens JID - 101238921 RN - 0 (Antiviral Restriction Factors) RN - 0 (Capsid Proteins) RN - 0 (Carrier Proteins) RN - 0 (Tripartite Motif Proteins) RN - EC 2.3.2.27 (TRIM5 protein, human) RN - EC 2.3.2.27 (Ubiquitin-Protein Ligases) SB - IM MH - Animals MH - Antiviral Restriction Factors MH - Base Sequence MH - Binding Sites MH - Capsid/*metabolism MH - Capsid Proteins/genetics/*metabolism MH - Carrier Proteins/*metabolism MH - Cell Line MH - Humans MH - Leukemia Virus, Murine/genetics/*metabolism MH - Macaca mulatta MH - Mice MH - Mutation MH - Protein Interaction Domains and Motifs MH - Sequence Analysis, DNA MH - Tripartite Motif Proteins MH - Ubiquitin-Protein Ligases PMC - PMC3068999 COIS- The authors have declared that no competing interests exist. EDAT- 2011/04/13 06:00 MHDA- 2011/12/14 06:00 PMCR- 2011/03/31 CRDT- 2011/04/13 06:00 PHST- 2010/11/05 00:00 [received] PHST- 2011/01/28 00:00 [accepted] PHST- 2011/04/13 06:00 [entrez] PHST- 2011/04/13 06:00 [pubmed] PHST- 2011/12/14 06:00 [medline] PHST- 2011/03/31 00:00 [pmc-release] AID - PPATHOGENS-D-10-00275 [pii] AID - 10.1371/journal.ppat.1002011 [doi] PST - ppublish SO - PLoS Pathog. 2011 Mar;7(3):e1002011. doi: 10.1371/journal.ppat.1002011. Epub 2011 Mar 31.