PMID- 21742759 OWN - NLM STAT- MEDLINE DCOM- 20111209 LR - 20211020 IS - 1362-4962 (Electronic) IS - 0305-1048 (Print) IS - 0305-1048 (Linking) VI - 39 IP - 18 DP - 2011 Oct TI - Fluorescence protection assay: a novel homogeneous assay platform toward development of aptamer sensors for protein detection. PG - e122 LID - 10.1093/nar/gkr559 [doi] AB - Development of novel aptamer sensor strategies for rapid and selective assays of protein biomarkers plays crucial roles in proteomics and clinical diagnostics. Herein, we have developed a novel aptamer sensor strategy for homogeneous detection of protein targets based on fluorescence protection assay. This strategy is based on our reasoning that interaction of aptamer with its protein target may dramatically increase steric hindrance, which protects the fluorophore, fluorescein isothiocyannate (FITC), labeled at the binding pocket from accessing and quenching by the FITC antibody. The aptamer sensor strategy is demonstrated using a model protein target of immunoglobulin E (IgE), a known biomarker associated with atopic allergic diseases. The results reveal that the aptamer sensor shows substantial (>6-fold) fluorescence enhancement in response to the protein target, thereby verifying the mechanism of fluorescence protection. Moreover, the aptamer sensor displays improved specificity to other co-existing proteins and a desirable dynamic range within the IgE concentration from 0.1 to 50 nM with a readily achieved detection limit of 0.1 nM. Because of great robustness, easy operation and scalability for parallel assays, the developed homogeneous fluorescence protection assay strategy might create a new methodology for developing aptamer sensors in sensitive, selective detection of proteins. FAU - Wang, Hong-Qi AU - Wang HQ AD - State Key Laboratory of Chemo/Bio-Sensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, P R China. FAU - Wu, Zhan AU - Wu Z FAU - Tang, Li-Juan AU - Tang LJ FAU - Yu, Ru-Qin AU - Yu RQ FAU - Jiang, Jian-Hui AU - Jiang JH LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20110708 PL - England TA - Nucleic Acids Res JT - Nucleic acids research JID - 0411011 RN - 0 (Aptamers, Nucleotide) RN - 0 (Fluorescent Dyes) RN - 0 (Proteins) RN - 37341-29-0 (Immunoglobulin E) SB - IM MH - Aptamers, Nucleotide/*chemistry MH - *Biosensing Techniques MH - Fluorescent Dyes MH - Fluorometry/*methods MH - Immunoglobulin E/analysis MH - Proteins/*analysis PMC - PMC3185441 EDAT- 2011/07/12 06:00 MHDA- 2011/12/14 06:00 PMCR- 2011/07/08 CRDT- 2011/07/12 06:00 PHST- 2011/07/12 06:00 [entrez] PHST- 2011/07/12 06:00 [pubmed] PHST- 2011/12/14 06:00 [medline] PHST- 2011/07/08 00:00 [pmc-release] AID - gkr559 [pii] AID - 10.1093/nar/gkr559 [doi] PST - ppublish SO - Nucleic Acids Res. 2011 Oct;39(18):e122. doi: 10.1093/nar/gkr559. Epub 2011 Jul 8.