PMID- 21775536 OWN - NLM STAT- MEDLINE DCOM- 20111216 LR - 20211020 IS - 1098-660X (Electronic) IS - 0095-1137 (Print) IS - 0095-1137 (Linking) VI - 49 IP - 9 DP - 2011 Sep TI - Epidemiology and evolutionary characteristics of the porcine reproductive and respiratory syndrome virus in China between 2006 and 2010. PG - 3175-83 LID - 10.1128/JCM.00234-11 [doi] AB - In 2006, an emerging highly pathogenic strain of porcine reproductive and respiratory syndrome virus (PRRSV), which causes continuous high fever and a high proportion of deaths in vaccinated pigs of all ages, broke out in mainland China and spread rapidly to neighboring countries. To examine the epidemiology and evolutionary characteristics of Chinese PRRSV after the 2006 outbreak, we tested 2,981 clinical samples collected from 2006 to 2010 in China, determined 153 Nsp2 sequences and 249 ORF5 sequences, and analyzed the epidemiology and genetic diversity of Chinese PRRSV. Our results showed that the percentage of PRRSV-positive specimens collected from sick pigs averaged 60.85% in the past 5 years and that the highly pathogenic PRRSV has become the dominant strain in China. Furthermore, a reemerging strain which apparently evolved from the highly pathogenic PRRSV strain in 2006 appeared to be widely prevalent in China from 2009 onwards. Sequence analyses revealed that the hypervariable region of Nsp2 in most of the isolates contained a discontinuous deletion equivalent to 30 amino acids, along with other types of deletions. Extensive amino acid substitutions in the GP5 sequence translated from ORF5 were found, particularly in the potential neutralization epitope and the N-glycosylation sites. Our results suggest that Chinese PRRSV has undergone rapid evolution and can circumvent immune responses induced by currently used vaccines. Information from this study will help in understanding the evolutionary characteristics of Chinese PRRSV and assist ongoing efforts to develop and use PRRSV vaccines in the future. FAU - Li, Bin AU - Li B AD - Institute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China. FAU - Fang, Liurong AU - Fang L FAU - Guo, Xueliang AU - Guo X FAU - Gao, Jianfeng AU - Gao J FAU - Song, Tao AU - Song T FAU - Bi, Jing AU - Bi J FAU - He, Kongwang AU - He K FAU - Chen, Huanchun AU - Chen H FAU - Xiao, Shaobo AU - Xiao S LA - eng SI - GENBANK/EU187484 SI - GENBANK/EU262603 SI - GENBANK/EU371943 SI - GENBANK/EU371944 SI - GENBANK/EU371945 SI - GENBANK/EU371946 SI - GENBANK/EU371947 SI - GENBANK/EU371948 SI - GENBANK/EU371949 SI - GENBANK/EU371950 SI - GENBANK/EU371951 SI - GENBANK/EU371952 SI - GENBANK/EU371953 SI - GENBANK/EU371954 SI - GENBANK/EU371955 SI - GENBANK/EU399822 SI - GENBANK/EU399823 SI - GENBANK/EU399824 SI - GENBANK/EU399825 SI - GENBANK/EU399826 SI - GENBANK/EU399827 SI - GENBANK/EU399828 SI - GENBANK/EU399829 SI - GENBANK/EU399830 SI - GENBANK/EU399831 SI - GENBANK/EU399832 SI - GENBANK/EU399833 SI - GENBANK/EU399834 SI - GENBANK/EU399835 SI - GENBANK/EU399836 SI - GENBANK/EU399837 SI - GENBANK/EU399838 SI - GENBANK/EU399839 SI - GENBANK/EU399840 SI - 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GENBANK/HQ832375 SI - GENBANK/HQ832376 SI - GENBANK/HQ832377 SI - GENBANK/HQ832378 SI - GENBANK/HQ832379 SI - GENBANK/HQ832380 SI - GENBANK/HQ832381 SI - GENBANK/HQ832382 SI - GENBANK/HQ832383 SI - GENBANK/HQ832384 SI - GENBANK/HQ832385 SI - GENBANK/HQ832386 SI - GENBANK/HQ832387 SI - GENBANK/HQ832388 SI - GENBANK/HQ832389 SI - GENBANK/HQ832390 SI - GENBANK/HQ832391 SI - GENBANK/HQ832392 SI - GENBANK/HQ832393 SI - GENBANK/HQ832394 SI - GENBANK/HQ832395 SI - GENBANK/HQ832396 SI - GENBANK/HQ832397 SI - GENBANK/HQ832398 SI - GENBANK/HQ832399 SI - GENBANK/HQ832400 SI - GENBANK/HQ832401 SI - GENBANK/HQ832402 SI - GENBANK/HQ832403 SI - GENBANK/HQ832404 SI - GENBANK/HQ832405 SI - GENBANK/HQ832406 SI - GENBANK/HQ832407 SI - GENBANK/HQ832408 SI - GENBANK/HQ832409 SI - GENBANK/HQ832410 SI - GENBANK/HQ832411 PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20110720 PL - United States TA - J Clin Microbiol JT - Journal of clinical microbiology JID - 7505564 RN - 0 (RNA, Viral) RN - 0 (Viral Proteins) SB - IM MH - Amino Acid Substitution MH - Animals MH - China/epidemiology MH - *Disease Outbreaks MH - *Evolution, Molecular MH - Molecular Epidemiology MH - Molecular Sequence Data MH - Polymorphism, Genetic MH - Porcine Reproductive and Respiratory Syndrome/*epidemiology/*virology MH - Porcine respiratory and reproductive syndrome virus/*classification/*genetics/isolation & purification MH - RNA, Viral/*genetics MH - Sequence Analysis, DNA MH - Sequence Deletion MH - Swine MH - Viral Proteins/genetics PMC - PMC3165578 EDAT- 2011/07/22 06:00 MHDA- 2011/12/17 06:00 PMCR- 2012/03/01 CRDT- 2011/07/22 06:00 PHST- 2011/07/22 06:00 [entrez] PHST- 2011/07/22 06:00 [pubmed] PHST- 2011/12/17 06:00 [medline] PHST- 2012/03/01 00:00 [pmc-release] AID - JCM.00234-11 [pii] AID - 0234-11 [pii] AID - 10.1128/JCM.00234-11 [doi] PST - ppublish SO - J Clin Microbiol. 2011 Sep;49(9):3175-83. doi: 10.1128/JCM.00234-11. Epub 2011 Jul 20.